HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:40.0 nTPM
HPA Brain:61.2 nTPM
GTEx:40.0 nTPM
FANTOM5:122.4 Scaled Tags Per Million
Pig:50.0 nTPM
Mouse:23.1 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039381
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 61.2
Sample id Sample description nTPM
Hippocampus
nTPM: 46.8
1898 Male, age 80, left hemisphere 55.1
1911 Female, age 85, right hemisphere 49.5
1855 Male, age 76, left hemisphere 46.0
2529 Female, age 94, left hemisphere 45.7
2148 Female, age 91, left hemisphere 42.7
2621 Female, age 67, right hemisphere 41.6
Dentate gyrus
nTPM: 51.8
2530 Female, age 94, left hemisphere 73.1
2010 Male, age 76, both hemispheres 58.5
1927 Female, age 91, both hemispheres 48.5
2246 Female, age 85, both hemispheres 47.8
2531 Female, age 67, both hemispheres 46.5
2528 Male, age 74, both hemispheres 36.6
Entorhinal gyrus
nTPM: 61.2
2764 Male, age 80, right hemisphere 66.3
2613 Female, age 94, left hemisphere 64.5
1938 Female, age 85, left hemisphere 63.9
2117 Female, age 91, right hemisphere 57.6
2686 Male, age 75, right hemisphere 57.5
1787 Male, age 76, left hemisphere 57.2
Hippocampus, CA1
nTPM: 50.6
2749 Male, age 80, left hemisphere 66.7
1873 Female, age 85, both hemispheres 55.8
2045 Male, age 76, both hemispheres 48.8
2527 Male, age 74, both hemispheres 42.2
2082 Female, age 91, right hemisphere 39.6
Hippocampus, CA2
nTPM: 46.0
1963 Male, age 80, left hemisphere 67.2
1892 Male, age 76, both hemispheres 49.4
2437 Female, age 94, left hemisphere 42.2
2249 Male, age 74, both hemispheres 41.4
1940 Female, age 85, left hemisphere 38.7
2113 Female, age 91, right hemisphere 37.3
Hippocampus, CA3
nTPM: 41.7
1891 Female, age 85, both hemispheres 60.5
1867 Male, age 76, both hemispheres 47.4
2137 Male, age 80, left hemisphere 46.5
2620 Female, age 94, left hemisphere 33.9
2861 Female, age 67, both hemispheres 32.9
2436 Male, age 74, both hemispheres 28.9
Parahippocampal cortex
nTPM: 51.1
1850 Male, age 80, both hemispheres 68.8
2532 Female, age 72, left hemisphere 63.4
1990 Female, age 91, right hemisphere 61.3
2692 Male, age 74, both hemispheres 54.3
1933 Female, age 85, both hemispheres 54.0
2018 Male, age 76, both hemispheres 50.8
2245 Female, age 91, both hemispheres 46.4
2693 Female, age 94, both hemispheres 44.8
2622 Female, age 67, right hemisphere 37.1
2250 Female, age 67, right hemisphere 29.9
Perirhinal gyrus
nTPM: 52.5
2848 Male, age 76, right hemisphere 62.7
1847 Female, age 91, left hemisphere 55.7
1794 Male, age 80, right hemisphere 54.9
1841 Female, age 85, right hemisphere 48.7
2521 Female, age 94, right hemisphere 40.6
Subiculum
nTPM: 55.8
1901 Male, age 80, both hemispheres 67.7
2438 Female, age 94, left hemisphere 67.4
1977 Female, age 85, both hemispheres 67.0
2042 Male, age 76, both hemispheres 62.1
2729 Female, age 91, right hemisphere 35.4
2619 Male, age 74, both hemispheres 35.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 40.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.0
Samples: 255

Max nTPM: 122.1
Min nTPM: 12.0
Std nTPM: 15.3
Median nTPM: 38.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 122.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 94.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 83.8
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 83.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 83.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 83.1
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 76.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 75.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 74.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 73.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 70.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 122.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.4
FF:10169-103B7 60 years, female 126.7
FF:10153-102I9 76 years, female 118.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 50.0
Pig sample Sample description nTPM
Subiculum
nTPM: 31.9
Samples: 4

Max nTPM: 36.1
Min nTPM: 25.3
Sample A Female 36.1
Sample B Female 32.2
Sample C Male 25.3
Sample D Male 33.9
Dorsal hippocampus
nTPM: 50.1
Samples: 4

Max nTPM: 69.0
Min nTPM: 37.7
Sample A Female 69.0
Sample B Female 47.0
Sample C Male 46.5
Sample D Male 37.7
Entorhinal cortex
nTPM: 27.8
Samples: 4

Max nTPM: 33.3
Min nTPM: 23.1
Sample A Female 25.8
Sample B Female 33.3
Sample C Male 23.1
Sample D Male 28.9
Ventral hippocampus
nTPM: 48.6
Samples: 4

Max nTPM: 63.5
Min nTPM: 31.8
Sample A Female 63.5
Sample B Female 31.8
Sample C Male 39.9
Sample D Male 59.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 23.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 21.2
Min nTPM: 16.3
Sample A Male 20.4
Sample B Male 21.2
Sample C Female 16.3
Sample D Female 16.9
Hippocampal formation
nTPM: 23.1
Samples: 4

Max nTPM: 28.3
Min nTPM: 17.7
Sample A Male 25.1
Sample B Male 17.7
Sample C Female 28.3
Sample D Female 21.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
79632219 Antisense, RP_071018_01_H01, Mouse strain C57BL/6J (56 days, male) 0.1

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