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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
30.5
Sample id
Sample description
nTPM
Amygdala nTPM: 24.5
2814
Male, age 76, right hemisphere
27.2
2695
Female, age 67, right hemisphere
27.0
1987
Female, age 91, left hemisphere
26.2
2517
Female, age 94, left hemisphere
21.9
2514
Male, age 75, right hemisphere
20.4
Basal amygdala nTPM: 23.5
2827
Female, age 67, right hemisphere
30.5
2110
Male, age 80, left hemisphere
26.6
2685
Female, age 94, left hemisphere
24.2
2609
Male, age 75, right hemisphere
22.8
2243
Female, age 91, right hemisphere
19.0
1955
Male, age 76, both hemispheres
18.0
Central amygdala nTPM: 28.7
2826
Female, age 94, left hemisphere
34.7
2515
Male, age 75, right hemisphere
28.7
1905
Male, age 76, both hemispheres
28.3
2239
Male, age 80, left hemisphere
27.7
2701
Female, age 91, right hemisphere
23.9
Corticomedial amygdala nTPM: 20.3
2535
Female, age 67, right hemisphere
26.4
2428
Male, age 75, right hemisphere
21.1
2829
Male, age 80, left hemisphere
20.6
2242
Female, age 91, right hemisphere
19.6
2429
Female, age 94, left hemisphere
19.3
2240
Male, age 76, both hemispheres
15.1
Lateral amygdala nTPM: 30.5
2830
Female, age 67, right hemisphere
41.5
2534
Female, age 94, left hemisphere
33.0
2256
Male, age 80, left hemisphere
28.1
2255
Female, age 91, right hemisphere
27.8
1883
Male, age 76, both hemispheres
26.9
2516
Male, age 75, right hemisphere
25.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
34.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 34.8
Samples: 181
Max nTPM: 86.2
Min nTPM: 15.8
Std nTPM: 13.1
Median nTPM: 32.1
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
86.2
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
81.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
78.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
71.4
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
68.9
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
68.0
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
66.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
65.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
64.5
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
62.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
62.2
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
61.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
58.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
57.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
55.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
55.3
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
54.8
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
54.6
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
53.9
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
53.7
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
51.4
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
50.6
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
50.4
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
49.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
48.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
48.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
47.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
45.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
45.8
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
45.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
45.2
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
45.1
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
44.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
44.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
44.2
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
43.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
43.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
42.9
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
41.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
41.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
41.2
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
41.1
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
40.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
40.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
39.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
39.5
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
39.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
39.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
38.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
38.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
38.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
38.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
38.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
37.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
37.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
37.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
37.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
37.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
37.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
36.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
36.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
36.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
36.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
36.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
36.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
35.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
35.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
35.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
35.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
34.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
34.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
34.5
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
34.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
34.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
34.3
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
34.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
33.9
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
33.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
33.6
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
33.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
33.4
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
33.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
32.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
32.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
32.7
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
32.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
32.5
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
32.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
32.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
32.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
32.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
31.9
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
31.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
31.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
31.5
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
31.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
31.0
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
30.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
30.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
30.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
30.5
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
30.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
30.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
30.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
30.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
29.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
29.4
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
28.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
28.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
28.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
28.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
28.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
28.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
28.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
27.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
27.9
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
27.8
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
27.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
27.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
27.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
27.3
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
27.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
27.2
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
26.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
26.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
26.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
26.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
26.5
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
26.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
26.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
26.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
26.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
25.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
25.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
25.1
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
24.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
24.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
24.8
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
24.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
24.7
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
24.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
24.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
24.2
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
24.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
24.0
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
24.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
23.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
23.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
23.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
23.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
23.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
23.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
22.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
22.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
22.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
22.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
22.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
22.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
22.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
22.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
22.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
21.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
21.9
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
21.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
21.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
21.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
21.5
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
21.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
21.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
21.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
21.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
20.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
20.4
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
20.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
19.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
18.7
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
18.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
17.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
16.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
16.6
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
15.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
9.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 9.9
Samples: 4
Max nTPM: 11.3
Min nTPM: 9.3
Sample A
Male
9.7
Sample B
Male
9.4
Sample C
Female
11.3
Sample D
Female
9.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.