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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Medium
Ovarian stroma cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1631.0 nTPM
HPA:896.3 nTPM
GTEx:1631.0 nTPM
FANTOM5:1250.7 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA004337
Follicle cells Medium
Ovarian stroma cells High



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

896.3
overview
Female, age 64
Ovary sample 192
nTPM: 568.8
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 449.7
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 396.7
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 711.6
N/A
Female, age 16
Ovary sample 3663
nTPM: 1394.4
N/A
Female, age 20
Ovary sample 3664
nTPM: 1151.6
N/A
Female, age 32
Ovary sample 3665
nTPM: 1601.4

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1631.0
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 1631.0
Samples: 193

Max nTPM: 4926.3
Min nTPM: 437.0
Std nTPM: 764.9
Median nTPM: 1468.7
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 4926.3
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 4130.9
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 3999.3
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 3581.8
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 3448.4
GTEX-R55G-1526-SM-48FER 40-49 years, female 3407.6
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 3383.0
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 3367.7
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 3163.5
GTEX-15EOM-1526-SM-68723 20-29 years, female 3142.9
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 3018.7
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 2976.1
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 2974.9
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 2904.2
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 2885.0
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 2815.9
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 2717.3
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 2704.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2665.6
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 2645.7
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 2642.8
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 2628.2
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 2625.1
GTEX-QCQG-1426-SM-48U22 50-59 years, female 2608.2
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 2589.0
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 2513.6
GTEX-145ME-1226-SM-5MR87 40-49 years, female 2478.5
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 2417.9
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 2395.7
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 2366.2
GTEX-R45C-2526-SM-GRR28 60-69 years, female 2363.0
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 2355.9
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 2320.6
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 2298.1
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 2280.5
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 2276.1
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 2149.5
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 2135.1
GTEX-S32W-1226-SM-4AD67 50-59 years, female 2128.4
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 2111.6
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 2107.1
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 2101.4
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 2086.9
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 2081.7
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 2075.4
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 2066.7
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2063.3
GTEX-S341-0726-SM-4AD5R 40-49 years, female 2054.9
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 2044.4
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 2038.3
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 2038.0
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 2000.2
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 1997.2
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 1987.0
GTEX-14JG6-0626-SM-68716 30-39 years, female 1985.4
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 1970.1
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 1955.8
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 1948.1
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 1918.8
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 1918.4
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 1903.9
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 1894.0
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 1880.9
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 1860.9
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 1853.9
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 1851.4
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 1837.0
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 1805.4
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 1797.3
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 1790.3
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 1778.5
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 1760.1
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 1759.4
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 1751.8
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 1736.7
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 1730.8
GTEX-11I78-1926-SM-59878 50-59 years, female 1656.0
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 1642.3
GTEX-183WM-1926-SM-72D5F 70-79 years, female 1633.9
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 1626.4
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 1608.7
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 1586.4
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 1586.0
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 1582.2
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 1550.2
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 1534.3
GTEX-13SLX-2426-SM-664OM 50-59 years, female 1530.3
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 1528.4
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 1528.2
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 1516.7
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 1500.8
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 1500.0
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 1494.2
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 1488.8
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 1488.6
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 1472.1
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1468.7
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 1461.9
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 1452.3
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 1424.8
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 1424.1
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 1420.5
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 1408.9
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 1405.8
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 1393.2
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 1380.6
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 1378.8
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 1377.0
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 1374.3
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1373.3
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 1367.4
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 1339.7
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 1335.4
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 1313.7
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 1311.1
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 1299.9
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 1294.3
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 1289.8
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 1278.8
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 1267.7
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 1257.5
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 1254.4
GTEX-RU72-2226-SM-46MUE 50-59 years, female 1251.4
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 1244.0
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 1221.2
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 1179.0
GTEX-14PKV-1226-SM-6871T 20-29 years, female 1164.1
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 1163.6
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 1156.3
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 1154.1
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 1148.3
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 1147.0
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 1146.9
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 1142.9
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 1141.8
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 1131.2
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 1127.7
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 1121.9
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 1118.8
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 1108.8
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 1090.4
GTEX-QVJO-3126-SM-COH22 60-69 years, female 1088.5
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 1085.4
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 1084.0
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 1052.8
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 1051.0
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 1049.3
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 1021.1
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 1018.9
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 986.2
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 985.1
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 974.9
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 971.8
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 971.2
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 963.2
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 960.8
GTEX-Q734-0726-SM-48TZP 40-49 years, female 952.9
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 948.5
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 948.0
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 944.4
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 935.2
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 925.0
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 914.5
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 913.5
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 905.4
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 891.7
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 863.5
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 858.6
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 858.4
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 844.9
GTEX-P78B-1926-SM-3P616 40-49 years, female 842.3
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 829.7
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 798.8
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 797.0
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 793.1
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 788.3
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 787.8
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 786.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 782.2
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 772.5
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 771.9
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 763.0
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 715.1
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 704.1
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 702.9
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 688.8
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 679.3
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 652.9
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 644.7
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 626.3
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 586.2
GTEX-18D9A-0826-SM-718C1 30-39 years, female 525.9
GTEX-14BIN-1426-SM-664NI 50-59 years, female 437.0
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OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1250.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 1250.7
FF:10020-101D2 47,75,84 years, female 1250.7

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