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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
367.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 258.9
2411
Female, age 72, unknown
313.2
1827
Male, age 72, unknown
303.4
2019
Male, age 18, unknown
274.4
1870
Female, age 42, unknown
270.2
2219
Male, age 76, both hemispheres
266.5
2828
Female, age 72, unknown
262.9
1833
Male, age 53, unknown
248.7
2666
Male, age 74, left hemisphere
246.6
1830
Male, age 51, unknown
235.5
2586
Male, age 75, left hemisphere
167.4
Dorsal raphe nucleus nTPM: 331.2
2298
Female, age 72, unknown
396.8
2047
Male, age 72, unknown
353.9
1828
Male, age 53, unknown
323.1
2750
Male, age 76, both hemispheres
322.9
2016
Female, age 72, unknown
259.3
Inferior colliculus nTPM: 241.6
2097
Female, age 72, unknown
267.1
1890
Male, age 53, unknown
239.0
1848
Female, age 42, unknown
235.3
2849
Male, age 72, unknown
225.0
Median raphe nucleus nTPM: 365.9
2220
Male, age 76, midline
365.9
Periaquaductal grey, anterior nTPM: 270.8
1947
Male, age 18, unknown
313.0
1795
Male, age 51, unknown
262.2
2502
Female, age 75, unknown
237.1
Periaquaductal grey, dorsal nTPM: 243.1
2850
Male, age 76, both hemispheres
285.5
1840
Male, age 53, unknown
255.9
2464
Female, age 72, unknown
226.6
1831
Male, age 72, unknown
204.3
Periaquaductal grey, lateral nTPM: 253.0
2272
Male, age 74, both hemispheres
267.8
2140
Male, age 76, both hemispheres
253.8
2053
Male, age 18, unknown
237.3
Pretectal area nTPM: 290.5
1817
Female, age 42, unknown
331.9
1816
Male, age 51, unknown
327.7
1944
Female, age 72, unknown
316.3
2667
Female, age 75, unknown
315.8
2007
Male, age 72, unknown
315.4
2273
Male, age 74, both hemispheres
304.5
2224
Female, age 72, unknown
292.4
1815
Male, age 53, unknown
283.5
2825
Male, age 18, unknown
255.1
2407
Male, age 75, both hemispheres
238.7
2316
Male, age 76, right hemisphere
214.3
Red nucleus nTPM: 265.7
1821
Female, age 72, unknown
368.8
2725
Female, age 75, unknown
336.6
1954
Female, age 42, unknown
290.3
2823
Male, age 76, right hemisphere
273.1
1865
Male, age 51, unknown
268.0
2503
Female, age 72, unknown
260.7
1904
Male, age 53, unknown
252.1
2785
Male, age 18, unknown
249.9
2769
Male, age 72, unknown
249.2
2227
Male, age 72, unknown
240.7
2588
Male, age 74, left hemisphere
201.5
2584
Male, age 75, left hemisphere
197.5
Substantia nigra nTPM: 367.9
1916
Female, age 42, unknown
515.7
2241
Male, age 72, unknown
467.7
1941
Male, age 53, unknown
437.7
1851
Male, age 51, unknown
415.1
1889
Female, age 72, unknown
367.7
2409
Female, age 72, unknown
364.4
2699
Male, age 18, unknown
353.6
2665
Male, age 74, both hemispheres
279.6
2590
Female, age 75, unknown
260.9
2583
Male, age 75, right hemisphere
216.2
Superior colliculus nTPM: 245.1
2587
Male, age 74, left hemisphere
299.1
1895
Male, age 76, right hemisphere
272.4
1796
Male, age 53, unknown
267.9
2668
Female, age 75, unknown
266.5
2087
Female, age 72, unknown
264.8
2261
Male, age 18, unknown
246.3
1839
Male, age 51, unknown
224.0
1913
Female, age 42, unknown
217.7
2664
Male, age 75, both hemispheres
201.7
1995
Male, age 72, unknown
190.2
Ventral tegmental area nTPM: 330.3
2410
Female, age 72, unknown
389.7
1915
Female, age 42, unknown
389.1
2218
Male, age 76, both hemispheres
374.4
1942
Male, age 51, unknown
289.1
2223
Female, age 72, unknown
288.5
2021
Male, age 53, unknown
251.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
648.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 648.4
Samples: 183
Max nTPM: 1384.3
Min nTPM: 305.3
Std nTPM: 190.0
Median nTPM: 604.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
1384.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
1236.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
1215.4
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
1181.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
1160.4
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
1134.4
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
1104.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
1083.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
1063.5
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
1045.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
986.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
983.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
978.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
977.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
970.1
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
940.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
927.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
918.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
906.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
903.0
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
897.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
897.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
883.0
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
876.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
871.1
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
866.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
861.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
859.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
853.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
826.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
824.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
809.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
805.8
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
803.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
802.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
780.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
773.8
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
762.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
759.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
758.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
755.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
748.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
747.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
745.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
740.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
739.0
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
737.3
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
727.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
725.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
720.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
712.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
708.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
702.7
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
699.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
698.9
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
696.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
695.1
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
684.5
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
684.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
674.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
673.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
670.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
666.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
666.2
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
665.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
665.6
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
663.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
658.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
655.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
647.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
646.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
646.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
646.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
646.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
644.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
643.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
641.0
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
639.3
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
639.3
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
639.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
631.6
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
628.9
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
618.9
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
617.9
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
615.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
614.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
614.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
614.2
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
614.0
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
611.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
608.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
604.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
601.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
599.2
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
597.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
595.2
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
595.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
588.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
587.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
585.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
584.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
582.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
578.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
577.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
575.7
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
575.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
573.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
564.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
561.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
561.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
560.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
559.3
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
556.4
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
553.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
552.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
549.0
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
548.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
548.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
545.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
544.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
544.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
543.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
541.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
538.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
538.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
537.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
535.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
533.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
533.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
527.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
525.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
525.2
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
524.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
523.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
522.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
521.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
518.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
518.7
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
517.9
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
517.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
517.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
515.4
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
515.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
508.1
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
506.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
505.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
503.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
501.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
499.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
497.3
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
494.7
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
493.6
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
492.1
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
490.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
489.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
488.8
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
485.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
484.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
482.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
473.1
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
468.4
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
465.6
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
464.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
458.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
458.1
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
456.9
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
454.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
444.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
441.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
435.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
430.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
427.1
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
424.3
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
408.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
407.2
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
402.1
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
393.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
390.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
388.0
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
387.9
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
382.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
354.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
305.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
123.8
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 122.2
Samples: 4
Max nTPM: 170.6
Min nTPM: 85.0
Sample A
Female
170.6
Sample B
Female
93.1
Sample C
Male
140.0
Sample D
Male
85.0
Midbrain nTPM: 123.9
Samples: 4
Max nTPM: 141.9
Min nTPM: 108.0
Sample A
Female
141.9
Sample B
Female
118.4
Sample C
Male
127.1
Sample D
Male
108.0
Periaqueductal gray nTPM: 98.3
Samples: 3
Max nTPM: 114.5
Min nTPM: 88.6
Sample B
Female
91.7
Sample C
Male
114.5
Sample D
Male
88.6
Superior colliculi nTPM: 123.6
Samples: 4
Max nTPM: 145.4
Min nTPM: 92.1
Sample A
Female
142.8
Sample B
Female
92.1
Sample C
Male
145.4
Sample D
Male
114.1
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
522.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 522.0
Samples: 4
Max nTPM: 552.6
Min nTPM: 491.4
Sample A
Male
552.6
Sample B
Male
519.1
Sample C
Female
491.4
Sample D
Female
524.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.