HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:947.9 nTPM
HPA Brain:338.8 nTPM
GTEx:947.9 nTPM
FANTOM5:92.3 Scaled Tags Per Million
Pig:8.2 nTPM
Mouse:912.7 nTPM
Allen mouse:19.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038751
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 338.8
Sample id Sample description nTPM
Hippocampus
nTPM: 338.8
1898 Male, age 80, left hemisphere 396.4
2529 Female, age 94, left hemisphere 360.8
2621 Female, age 67, right hemisphere 349.0
1911 Female, age 85, right hemisphere 326.9
2148 Female, age 91, left hemisphere 307.2
1855 Male, age 76, left hemisphere 292.4
Dentate gyrus
nTPM: 333.7
2530 Female, age 94, left hemisphere 381.7
2010 Male, age 76, both hemispheres 378.6
2531 Female, age 67, both hemispheres 344.6
2246 Female, age 85, both hemispheres 302.0
2528 Male, age 74, both hemispheres 299.8
1927 Female, age 91, both hemispheres 295.3
Entorhinal gyrus
nTPM: 317.2
2686 Male, age 75, right hemisphere 409.2
2117 Female, age 91, right hemisphere 333.6
1787 Male, age 76, left hemisphere 325.7
2764 Male, age 80, right hemisphere 294.3
1938 Female, age 85, left hemisphere 287.8
2613 Female, age 94, left hemisphere 252.5
Hippocampus, CA1
nTPM: 310.2
2045 Male, age 76, both hemispheres 336.9
2082 Female, age 91, right hemisphere 321.7
2749 Male, age 80, left hemisphere 306.2
1873 Female, age 85, both hemispheres 304.9
2527 Male, age 74, both hemispheres 281.1
Hippocampus, CA2
nTPM: 313.3
1963 Male, age 80, left hemisphere 362.0
2437 Female, age 94, left hemisphere 324.6
1940 Female, age 85, left hemisphere 306.5
1892 Male, age 76, both hemispheres 302.6
2113 Female, age 91, right hemisphere 299.3
2249 Male, age 74, both hemispheres 284.9
Hippocampus, CA3
nTPM: 316.7
2861 Female, age 67, both hemispheres 398.1
1867 Male, age 76, both hemispheres 359.1
1891 Female, age 85, both hemispheres 320.1
2436 Male, age 74, both hemispheres 292.9
2137 Male, age 80, left hemisphere 270.5
2620 Female, age 94, left hemisphere 259.2
Parahippocampal cortex
nTPM: 280.9
2018 Male, age 76, both hemispheres 408.4
1933 Female, age 85, both hemispheres 281.5
1850 Male, age 80, both hemispheres 280.4
2692 Male, age 74, both hemispheres 278.6
2532 Female, age 72, left hemisphere 272.1
2250 Female, age 67, right hemisphere 271.4
2245 Female, age 91, both hemispheres 268.9
1990 Female, age 91, right hemisphere 267.5
2622 Female, age 67, right hemisphere 265.7
2693 Female, age 94, both hemispheres 214.4
Perirhinal gyrus
nTPM: 274.1
1794 Male, age 80, right hemisphere 306.8
1841 Female, age 85, right hemisphere 275.9
2848 Male, age 76, right hemisphere 269.3
1847 Female, age 91, left hemisphere 267.9
2521 Female, age 94, right hemisphere 250.7
Subiculum
nTPM: 325.2
2042 Male, age 76, both hemispheres 414.6
1977 Female, age 85, both hemispheres 343.9
1901 Male, age 80, both hemispheres 320.2
2729 Female, age 91, right hemisphere 316.5
2619 Male, age 74, both hemispheres 284.7
2438 Female, age 94, left hemisphere 271.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 947.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 947.9
Samples: 255

Max nTPM: 2444.7
Min nTPM: 413.7
Std nTPM: 299.9
Median nTPM: 902.6
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2444.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2239.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1974.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1904.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1836.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1753.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1648.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1611.9
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1605.2
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 1574.6
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1526.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 92.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.3
FF:10169-103B7 60 years, female 112.1
FF:10153-102I9 76 years, female 72.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 8.2
Pig sample Sample description nTPM
Subiculum
nTPM: 5.4
Samples: 4

Max nTPM: 6.8
Min nTPM: 3.4
Sample A Female 6.8
Sample B Female 5.4
Sample C Male 5.8
Sample D Male 3.4
Dorsal hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 9.6
Min nTPM: 5.8
Sample A Female 9.6
Sample B Female 5.8
Sample C Male 7.2
Sample D Male 6.2
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 8.8
Min nTPM: 7.1
Sample A Female 8.8
Sample B Female 8.0
Sample C Male 8.8
Sample D Male 7.1
Ventral hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 8.9
Min nTPM: 6.8
Sample A Female 6.8
Sample B Female 7.5
Sample C Male 8.9
Sample D Male 6.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 912.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 870.6
Samples: 4

Max nTPM: 962.0
Min nTPM: 708.8
Sample A Male 934.6
Sample B Male 877.0
Sample C Female 962.0
Sample D Female 708.8
Hippocampal formation
nTPM: 912.7
Samples: 4

Max nTPM: 1082.1
Min nTPM: 822.1
Sample A Male 1082.1
Sample B Male 904.4
Sample C Female 842.1
Sample D Female 822.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.5
71764512 Antisense, RP_050926_01_C10, Mouse strain C57BL/6J (56 days, male) 19.5

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