HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.2 nTPM
HPA Brain:16.8 nTPM
GTEx:6.2 nTPM
FANTOM5:13.8 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:12.1 nTPM
Allen mouse:1.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 16.8
Sample id Sample description nTPM
Hippocampus
nTPM: 16.2
1911 Female, age 85, right hemisphere 17.3
2148 Female, age 91, left hemisphere 16.7
2529 Female, age 94, left hemisphere 16.0
2621 Female, age 67, right hemisphere 15.8
1855 Male, age 76, left hemisphere 15.7
1898 Male, age 80, left hemisphere 15.6
Dentate gyrus
nTPM: 16.3
2531 Female, age 67, both hemispheres 17.2
1927 Female, age 91, both hemispheres 16.3
2010 Male, age 76, both hemispheres 16.3
2246 Female, age 85, both hemispheres 16.3
2530 Female, age 94, left hemisphere 16.2
2528 Male, age 74, both hemispheres 15.7
Entorhinal gyrus
nTPM: 15.9
2117 Female, age 91, right hemisphere 17.0
2686 Male, age 75, right hemisphere 16.4
1938 Female, age 85, left hemisphere 16.3
2613 Female, age 94, left hemisphere 16.0
2764 Male, age 80, right hemisphere 15.1
1787 Male, age 76, left hemisphere 14.7
Hippocampus, CA1
nTPM: 16.5
2045 Male, age 76, both hemispheres 17.6
1873 Female, age 85, both hemispheres 16.7
2749 Male, age 80, left hemisphere 16.4
2527 Male, age 74, both hemispheres 16.2
2082 Female, age 91, right hemisphere 15.3
Hippocampus, CA2
nTPM: 15.7
1963 Male, age 80, left hemisphere 17.4
2113 Female, age 91, right hemisphere 16.8
2249 Male, age 74, both hemispheres 15.7
1940 Female, age 85, left hemisphere 15.1
1892 Male, age 76, both hemispheres 14.9
2437 Female, age 94, left hemisphere 14.3
Hippocampus, CA3
nTPM: 15.9
1891 Female, age 85, both hemispheres 18.2
2861 Female, age 67, both hemispheres 16.2
2436 Male, age 74, both hemispheres 15.8
1867 Male, age 76, both hemispheres 15.3
2137 Male, age 80, left hemisphere 15.2
2620 Female, age 94, left hemisphere 14.8
Parahippocampal cortex
nTPM: 16.0
2693 Female, age 94, both hemispheres 17.3
2018 Male, age 76, both hemispheres 17.1
1850 Male, age 80, both hemispheres 17.0
1933 Female, age 85, both hemispheres 16.7
2692 Male, age 74, both hemispheres 16.4
1990 Female, age 91, right hemisphere 16.3
2532 Female, age 72, left hemisphere 15.5
2250 Female, age 67, right hemisphere 14.6
2622 Female, age 67, right hemisphere 14.6
2245 Female, age 91, both hemispheres 14.5
Perirhinal gyrus
nTPM: 15.6
2848 Male, age 76, right hemisphere 17.3
1841 Female, age 85, right hemisphere 16.9
2521 Female, age 94, right hemisphere 15.1
1847 Female, age 91, left hemisphere 14.6
1794 Male, age 80, right hemisphere 14.4
Subiculum
nTPM: 16.8
2729 Female, age 91, right hemisphere 18.3
2042 Male, age 76, both hemispheres 17.9
1977 Female, age 85, both hemispheres 16.8
1901 Male, age 80, both hemispheres 16.6
2438 Female, age 94, left hemisphere 16.4
2619 Male, age 74, both hemispheres 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 6.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.2
Samples: 255

Max nTPM: 14.2
Min nTPM: 3.0
Std nTPM: 1.9
Median nTPM: 5.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 14.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 13.0
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 12.8
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 12.3
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 12.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 12.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 11.9
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 11.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 11.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 11.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 10.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.8
FF:10153-102I9 76 years, female 22.5
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.5
Pig sample Sample description nTPM
Subiculum
nTPM: 11.5
Samples: 4

Max nTPM: 12.0
Min nTPM: 11.0
Sample A Female 11.8
Sample B Female 11.0
Sample C Male 11.1
Sample D Male 12.0
Dorsal hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.6
Sample A Female 11.0
Sample B Female 10.6
Sample C Male 12.5
Sample D Male 11.1
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 13.8
Min nTPM: 10.2
Sample A Female 10.3
Sample B Female 13.8
Sample C Male 11.0
Sample D Male 10.2
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 12.2
Min nTPM: 9.0
Sample A Female 11.2
Sample B Female 12.2
Sample C Male 9.0
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 13.1
Min nTPM: 10.7
Sample A Male 13.1
Sample B Male 13.1
Sample C Female 10.7
Sample D Female 11.6
Hippocampal formation
nTPM: 11.7
Samples: 4

Max nTPM: 13.1
Min nTPM: 10.8
Sample A Male 11.8
Sample B Male 13.1
Sample C Female 10.8
Sample D Female 11.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
68410578 Antisense, RP_041214_02_B11, Mouse strain C57BL/6J (56 days, male) 1.1

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