We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HSPD1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • HSPD1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:132.9 nTPM
HPA Brain:116.6 nTPM
GTEx:132.9 nTPM
Pig:79.4 nTPM
Mouse:209.5 nTPM
Allen mouse:6.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 87.8
2226 Male, age 75, left hemisphere 90.8
1961 Female, age 42, unknown 84.8
Dorsomedial nucleus
nTPM: 91.7
1989 Male, age 62, unknown 99.7
2041 Female, age 72, unknown 99.5
2017 Female, age 42, unknown 75.8
Lateral hypothalamic area
nTPM: 103.0
2228 Male, age 66, unknown 125.0
1791 Male, age 80, right hemisphere 116.1
2271 Male, age 75, both hemispheres 90.0
2412 Male, age 62, unknown 81.0
Mammillary body
nTPM: 116.6
1923 Female, age 72, unknown 143.1
2413 Male, age 66, unknown 118.5
1948 Female, age 72, unknown 111.2
1945 Male, age 80, right hemisphere 110.6
1834 Female, age 42, unknown 99.8
Paraventricular nucleus
nTPM: 89.6
2700 Male, age 62, unknown 89.6
Preoptic area
nTPM: 102.6
1907 Male, age 80, right hemisphere 115.5
1861 Female, age 42, unknown 106.3
2414 Female, age 72, unknown 86.1
Supraoptic nucleus
nTPM: 115.1
1894 Female, age 72, unknown 144.9
2043 Male, age 62, unknown 102.7
2835 Female, age 72, unknown 97.8
Ventromedial nucleus
nTPM: 102.7
1982 Female, age 72, unknown 109.3
1822 Female, age 42, unknown 96.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 132.9
Samples: 257

Max nTPM: 628.2
Min nTPM: 60.7
Std nTPM: 71.9
Median nTPM: 116.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 628.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 617.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 602.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 460.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 403.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 371.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 333.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 316.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 304.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 297.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 288.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 269.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 246.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 220.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 218.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 214.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 207.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 206.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 198.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 195.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 194.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 190.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 188.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 185.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 182.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 164.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 163.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 160.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 157.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 155.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 154.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 151.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 151.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 151.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 149.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 147.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 146.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 144.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 144.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 142.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 142.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 141.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 141.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 141.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 140.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 140.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 140.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 139.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 138.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 138.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 138.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 137.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 137.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 136.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 135.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 135.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 135.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 134.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 134.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 132.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 132.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 132.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 131.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 131.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 131.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 131.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 130.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 130.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 130.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 129.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 129.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 129.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 128.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 127.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 127.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 127.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 127.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 127.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 125.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 125.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 125.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 124.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 124.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 124.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 124.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 124.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 123.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 123.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 123.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 123.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 123.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 122.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 122.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 122.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 122.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 122.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 122.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 122.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 122.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 121.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 121.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 121.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 121.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 121.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 121.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 120.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 120.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 120.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 119.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 119.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 119.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 119.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 119.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 119.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 118.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 118.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 118.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 117.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 117.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 117.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 117.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 117.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 117.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 117.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 117.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 117.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 116.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 116.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 116.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 116.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 116.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 115.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 115.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 115.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 114.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 114.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 114.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 114.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 114.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 113.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 113.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 113.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 113.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 113.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 112.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 112.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 112.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 112.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 111.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 111.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 111.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 111.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 111.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 111.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 111.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 111.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 110.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 110.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 110.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 110.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 110.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 110.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 110.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 109.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 108.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 108.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 107.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 107.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 107.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 107.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 107.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 106.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 106.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 106.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 106.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 106.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 106.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 106.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 105.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 105.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 105.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 105.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 105.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 105.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 105.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 104.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 104.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 104.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 104.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 104.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 104.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 103.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 103.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 103.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 103.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 103.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 103.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 103.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 103.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 103.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 102.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 102.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 102.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 102.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 102.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 102.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 102.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 101.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 101.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 101.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 101.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 101.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 100.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 100.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 100.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 99.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 99.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 98.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 98.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 98.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 98.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 97.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 97.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 97.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 97.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 97.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 96.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 95.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 95.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 94.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 94.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 94.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 94.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 94.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 93.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 93.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 93.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 92.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 92.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 92.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 91.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 90.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 90.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 89.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 89.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 89.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 88.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 88.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 87.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 86.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 82.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 81.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 75.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 74.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 72.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 63.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 60.7
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 79.4
Samples: 4

Max nTPM: 99.5
Min nTPM: 64.7
Sample A Female 99.5
Sample B Female 82.7
Sample C Male 70.8
Sample D Male 64.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

209.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 209.5
Samples: 4

Max nTPM: 215.8
Min nTPM: 197.2
Sample A Male 197.2
Sample B Male 214.0
Sample C Female 215.8
Sample D Female 211.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.6
69169385 Antisense, RP_050321_03_D12, Mouse strain C57BL/6J (56 days, male) 6.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo