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ALDH1L1
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • ALDH1L1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

126.882
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:22.4 nTPM
HPA Brain:72.9 nTPM
GTEx:22.4 nTPM
Pig:19.5 nTPM
Mouse:45.4 nTPM
Allen mouse:3.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA036900
Hypothalamus mean intensity 126.882
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 42.984
Mammillary nucleus -
Periventricular hypothalamic nucleus 126.882
Supraoptic nucleus 59.615
Tuberal nucleus 59.555
Ventral tuberomammillary nucleus -
Lateral preoptic area 65.539
Medial preoptic area 77.596
Suprachiasmatic nucleus 54.595
Paraventricular hypothalamic nucleus 33.907
Anterior hypothalamic area, central 34.042
Ventral medial hypothalamic nucleus 65.459
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 82.691
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 47.033
Dorsal medial hypothalamic nucleus 59.567
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 33.9
1961 Female, age 42, unknown 36.3
2226 Male, age 75, left hemisphere 31.5
Dorsomedial nucleus
nTPM: 46.9
1989 Male, age 62, unknown 56.4
2017 Female, age 42, unknown 44.0
2041 Female, age 72, unknown 40.2
Lateral hypothalamic area
nTPM: 36.4
1791 Male, age 80, right hemisphere 58.0
2412 Male, age 62, unknown 33.4
2271 Male, age 75, both hemispheres 28.4
2228 Male, age 66, unknown 25.9
Mammillary body
nTPM: 72.9
1834 Female, age 42, unknown 88.4
1923 Female, age 72, unknown 81.2
1945 Male, age 80, right hemisphere 68.3
1948 Female, age 72, unknown 64.2
2413 Male, age 66, unknown 62.5
Paraventricular nucleus
nTPM: 33.8
2700 Male, age 62, unknown 33.8
Preoptic area
nTPM: 51.9
1861 Female, age 42, unknown 58.4
2414 Female, age 72, unknown 49.0
1907 Male, age 80, right hemisphere 48.5
Supraoptic nucleus
nTPM: 52.9
1894 Female, age 72, unknown 60.9
2043 Male, age 62, unknown 56.2
2835 Female, age 72, unknown 41.7
Ventromedial nucleus
nTPM: 36.8
1982 Female, age 72, unknown 38.5
1822 Female, age 42, unknown 35.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 22.4
Samples: 257

Max nTPM: 137.5
Min nTPM: 4.1
Std nTPM: 16.0
Median nTPM: 18.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 137.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 96.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 95.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 91.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 87.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 71.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 64.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 63.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 62.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 55.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 51.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 50.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 49.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 48.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 47.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 47.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 46.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 46.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 42.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 41.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 40.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 38.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 38.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 38.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 38.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 37.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 37.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 36.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 36.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 36.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 35.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 34.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 34.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 34.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 34.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 34.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 33.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 32.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 32.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 31.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 31.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 31.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 31.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 31.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 30.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 30.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 30.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 30.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 30.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 29.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 28.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 27.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 27.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 27.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 27.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 27.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 27.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 27.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 26.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 26.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 26.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 26.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 26.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 26.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 25.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 25.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 25.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 25.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 25.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 25.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 24.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 24.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 24.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 24.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 24.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 24.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 24.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 23.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 23.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 23.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 23.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 23.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 23.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 23.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 23.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 22.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 22.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 22.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 22.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 22.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 22.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 22.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 22.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 22.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 22.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 21.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 21.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 21.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 21.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 21.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 21.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 21.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 21.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 20.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 20.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 20.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 20.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 20.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 20.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 20.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 20.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 20.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 20.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 20.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 19.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 19.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 19.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 19.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 19.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 19.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 19.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 19.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 19.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 18.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 18.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 18.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 18.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 18.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 18.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 18.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 18.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 18.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 18.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 18.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 18.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 18.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 18.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 18.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 17.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 17.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 17.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 17.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 17.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 17.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 17.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 17.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 16.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 16.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 16.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 16.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 16.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 16.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 16.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 16.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 16.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 16.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 16.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 16.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 16.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 15.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 15.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 15.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 15.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 15.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 15.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 15.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 15.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 15.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 14.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 14.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 14.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 14.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 14.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 14.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 14.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 14.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 14.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 14.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 14.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 14.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 14.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 13.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 13.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 13.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 13.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 13.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 13.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 13.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 13.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 13.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 13.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 13.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 13.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 13.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 13.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 12.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 12.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 12.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 12.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 12.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 12.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 12.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 12.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 12.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 12.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 12.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 11.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 11.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 11.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 11.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 11.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 11.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 11.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 11.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 11.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 11.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 11.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 10.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 10.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 10.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 10.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 10.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 10.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 10.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 10.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 10.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 10.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 10.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 10.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 10.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 10.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 10.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 9.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 9.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 9.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 8.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 8.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 8.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 8.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 8.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 8.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 8.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 8.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 7.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 7.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 7.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 7.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 7.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 7.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 7.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 6.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 6.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 5.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 5.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 5.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 4.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 4.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 19.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 11.1
Sample A Female 23.8
Sample B Female 25.3
Sample C Male 17.8
Sample D Male 11.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 45.5
Samples: 4

Max nTPM: 49.6
Min nTPM: 41.8
Sample A Male 42.0
Sample B Male 48.4
Sample C Female 41.8
Sample D Female 49.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.2
1725 Antisense, RP_040604_01_B01, Mouse strain C57BL/6J (56 days, male) 3.2
1724 Antisense, RP_040604_01_B01, Mouse strain C57BL/6J (56 days, male) 1.0

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