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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
Tissue methods
VAGINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:8.6 nTPM
GTEx:8.6 nTPM
FANTOM5:3.6 Scaled Tags Per Million

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.6
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 8.6
Samples: 170

Max nTPM: 31.5
Min nTPM: 0.6
Std nTPM: 4.9
Median nTPM: 8.1
GTEX-WYBS-2826-SM-GOQYI 60-69 years, female 31.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 23.8
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 22.2
GTEX-RTLS-2126-SM-GPRWH 60-69 years, female 22.0
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 21.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 20.4
GTEX-13FTY-2026-SM-GIN9K 40-49 years, female 18.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 17.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 17.5
GTEX-ZVZQ-2726-SM-GPRY1 60-69 years, female 17.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 16.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 16.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 15.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 15.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 15.5
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 15.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 15.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 15.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 14.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 14.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 13.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 13.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 13.5
GTEX-WI4N-2626-SM-GPI8F 40-49 years, female 13.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 13.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 13.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 13.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 12.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 12.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 12.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 12.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 12.8
GTEX-16MT8-2426-SM-GQ1DK 60-69 years, female 12.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 12.1
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 12.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 12.1
GTEX-R45C-2226-SM-GQ1EF 60-69 years, female 12.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 11.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 11.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 11.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 11.4
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 11.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 11.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 11.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 11.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 11.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 11.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 10.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 10.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 10.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 10.7
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 10.4
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 10.4
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 10.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 10.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 10.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 10.1
GTEX-RNOR-2526-SM-F21KT 50-59 years, female 10.1
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 9.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 9.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 9.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 9.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 9.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 9.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 9.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 9.3
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 9.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 9.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 9.1
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 9.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 9.0
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 8.9
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 8.8
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 8.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 8.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 8.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 8.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 8.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 8.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 8.4
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 8.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 8.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 8.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 8.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 8.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 8.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 8.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 7.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 7.8
GTEX-147F3-1526-SM-5MR7L 50-59 years, female 7.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 7.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 7.5
GTEX-139D8-2626-SM-GJ3QN 30-39 years, female 7.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 7.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 7.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 7.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 7.2
GTEX-OXRK-2026-SM-GOQY5 50-59 years, female 6.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 6.7
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 6.7
GTEX-S4UY-1026-SM-4AD53 40-49 years, female 6.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 6.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 6.3
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 6.2
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 6.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 6.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 6.2
GTEX-W5X1-2226-SM-GRR1G 40-49 years, female 6.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 6.2
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 6.1
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 6.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 6.1
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 5.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 5.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 5.9
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 5.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 5.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 5.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 5.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 5.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 5.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 5.3
GTEX-1MA7W-1226-SM-HL9SB 20-29 years, female 5.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 5.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 4.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 4.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 4.9
GTEX-XYKS-2826-SM-H7OG8 60-69 years, female 4.9
GTEX-14A5I-2726-SM-5MR84 50-59 years, female 4.8
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 4.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 4.6
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 4.6
GTEX-O5YV-2226-SM-HM8V7 60-69 years, female 4.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 4.4
GTEX-1LKK1-1826-SM-GNIPA 50-59 years, female 4.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 4.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 4.1
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 4.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 3.9
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 3.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 3.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 3.8
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 3.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 3.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 3.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 3.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 3.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 3.6
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 3.6
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 3.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 3.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 3.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 3.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 3.4
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 3.4
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 3.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 3.0
GTEX-ZAJG-2926-SM-5HL8P 50-59 years, female 2.9
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 2.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 2.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 2.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 2.7
GTEX-14PKU-1326-SM-6871B 40-49 years, female 2.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 2.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 2.2
GTEX-132AR-1626-SM-5EGHP 50-59 years, female 1.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 0.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 0.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 3.6
FF:10204-103F6 68 years, female 3.6

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