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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:33.4 nTPM
HPA Brain:35.6 nTPM
GTEx:33.4 nTPM
Pig:57.3 nTPM
Mouse:81.8 nTPM
Allen mouse:4.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 21.0
2226 Male, age 75, left hemisphere 25.5
1961 Female, age 42, unknown 16.4
Dorsomedial nucleus
nTPM: 16.6
2041 Female, age 72, unknown 21.4
1989 Male, age 62, unknown 15.3
2017 Female, age 42, unknown 13.1
Lateral hypothalamic area
nTPM: 25.6
1791 Male, age 80, right hemisphere 31.5
2228 Male, age 66, unknown 25.3
2271 Male, age 75, both hemispheres 23.6
2412 Male, age 62, unknown 22.1
Mammillary body
nTPM: 21.8
1923 Female, age 72, unknown 28.3
1945 Male, age 80, right hemisphere 20.7
1948 Female, age 72, unknown 20.7
2413 Male, age 66, unknown 19.8
1834 Female, age 42, unknown 19.2
Paraventricular nucleus
nTPM: 21.8
2700 Male, age 62, unknown 21.8
Preoptic area
nTPM: 18.3
1907 Male, age 80, right hemisphere 20.0
2414 Female, age 72, unknown 18.7
1861 Female, age 42, unknown 16.3
Supraoptic nucleus
nTPM: 35.6
2835 Female, age 72, unknown 42.6
2043 Male, age 62, unknown 34.3
1894 Female, age 72, unknown 29.9
Ventromedial nucleus
nTPM: 15.1
1982 Female, age 72, unknown 16.0
1822 Female, age 42, unknown 14.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 33.4
Samples: 257

Max nTPM: 193.2
Min nTPM: 12.2
Std nTPM: 21.2
Median nTPM: 28.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 193.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 162.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 131.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 113.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 103.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 101.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 98.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 89.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 82.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 78.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 78.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 78.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 74.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 73.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 69.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 68.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 63.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 62.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 60.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 55.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 54.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 54.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 53.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 52.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 51.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 50.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 50.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 50.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 49.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 49.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 49.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 47.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 46.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 46.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 45.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 44.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 43.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 43.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 42.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 42.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 42.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 42.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 41.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 39.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 39.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 39.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 39.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 38.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 38.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 38.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 38.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 37.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 37.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 37.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 37.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 37.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 37.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 37.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 37.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 36.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 36.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 35.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 35.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 35.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 35.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 34.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 34.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 34.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 34.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 33.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 33.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 33.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 33.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 33.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 33.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 33.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 33.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 33.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 33.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 32.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 32.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 32.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 32.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 32.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 31.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 31.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 31.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 31.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 31.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 31.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 31.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 31.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 31.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 31.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 31.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 31.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 31.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 31.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 31.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 30.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 30.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 30.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 30.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 29.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 29.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 29.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 29.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 29.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 29.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 29.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 29.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 29.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 29.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 29.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 29.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 29.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 29.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 29.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 29.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 28.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 28.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 28.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 28.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 28.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 28.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 28.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 28.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 28.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 28.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 27.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 27.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 27.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 27.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 27.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 27.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 27.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 27.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 27.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 27.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 27.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 27.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 27.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 26.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 26.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 26.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 26.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 26.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 26.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 26.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 26.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 26.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 26.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 26.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 26.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 26.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 26.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 25.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 25.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 25.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 25.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 25.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 25.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 25.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 25.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 25.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 25.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 24.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 24.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 24.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 24.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 24.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 24.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 24.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 24.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 24.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 23.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 23.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 23.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 23.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 23.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 23.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 23.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 23.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 23.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 23.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 23.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 23.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 23.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 23.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 22.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 22.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 22.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 22.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 22.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 22.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 22.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 22.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 22.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 22.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 22.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 21.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 21.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 21.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 21.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 21.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 21.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 21.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 21.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 21.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 21.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 20.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 20.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 20.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 20.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 20.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 20.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 20.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 20.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 20.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 20.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 20.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 20.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 19.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 19.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 19.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 19.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 19.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 19.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 19.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 19.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 19.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 19.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 18.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 18.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 18.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 18.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 18.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 18.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 18.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 17.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 17.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 17.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 17.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 17.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 17.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 17.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 16.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 16.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 16.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 16.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 16.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 15.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 15.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 15.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 14.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 14.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 12.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 57.3
Samples: 4

Max nTPM: 70.7
Min nTPM: 51.2
Sample A Female 70.7
Sample B Female 51.2
Sample C Male 55.8
Sample D Male 51.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 81.8
Samples: 4

Max nTPM: 89.1
Min nTPM: 77.0
Sample A Male 77.0
Sample B Male 77.5
Sample C Female 89.1
Sample D Female 83.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.5
69114211 Antisense, RP_050317_01_C08, Mouse strain C57BL/6J (56 days, male) 4.5

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