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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:142.9 nTPM
HPA Brain:275.5 nTPM
GTEx:142.9 nTPM
Pig:99.6 nTPM
Mouse:197.9 nTPM
Allen mouse:16.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

275.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 275.5
2226 Male, age 75, left hemisphere 365.7
1961 Female, age 42, unknown 185.2
Dorsomedial nucleus
nTPM: 138.8
2041 Female, age 72, unknown 160.8
1989 Male, age 62, unknown 141.0
2017 Female, age 42, unknown 114.6
Lateral hypothalamic area
nTPM: 195.3
1791 Male, age 80, right hemisphere 236.9
2228 Male, age 66, unknown 216.0
2271 Male, age 75, both hemispheres 202.3
2412 Male, age 62, unknown 125.8
Mammillary body
nTPM: 96.0
1923 Female, age 72, unknown 121.9
2413 Male, age 66, unknown 110.0
1948 Female, age 72, unknown 89.6
1945 Male, age 80, right hemisphere 79.9
1834 Female, age 42, unknown 78.4
Paraventricular nucleus
nTPM: 115.3
2700 Male, age 62, unknown 115.3
Preoptic area
nTPM: 122.6
1907 Male, age 80, right hemisphere 179.8
2414 Female, age 72, unknown 98.3
1861 Female, age 42, unknown 89.7
Supraoptic nucleus
nTPM: 123.4
1894 Female, age 72, unknown 127.2
2835 Female, age 72, unknown 124.1
2043 Male, age 62, unknown 118.8
Ventromedial nucleus
nTPM: 162.6
1982 Female, age 72, unknown 167.7
1822 Female, age 42, unknown 157.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 142.9
Samples: 257

Max nTPM: 353.6
Min nTPM: 30.6
Std nTPM: 59.2
Median nTPM: 141.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 353.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 326.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 319.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 309.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 300.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 298.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 281.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 258.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 250.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 249.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 249.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 243.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 239.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 236.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 235.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 234.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 233.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 233.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 233.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 231.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 229.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 225.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 224.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 223.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 221.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 217.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 217.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 210.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 209.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 206.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 205.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 205.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 204.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 204.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 203.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 203.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 202.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 201.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 201.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 199.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 198.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 196.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 196.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 194.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 194.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 193.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 191.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 190.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 189.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 188.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 188.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 188.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 188.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 187.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 187.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 186.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 186.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 186.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 186.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 186.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 185.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 184.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 183.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 183.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 183.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 181.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 181.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 180.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 180.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 179.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 178.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 177.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 177.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 175.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 173.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 173.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 173.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 171.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 171.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 170.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 170.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 170.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 169.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 168.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 167.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 167.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 166.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 165.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 164.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 163.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 163.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 162.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 161.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 161.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 160.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 156.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 156.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 155.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 155.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 155.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 153.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 153.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 153.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 152.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 151.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 151.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 149.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 148.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 148.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 146.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 146.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 145.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 145.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 145.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 144.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 144.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 144.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 144.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 144.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 143.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 143.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 143.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 142.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 142.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 142.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 141.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 141.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 141.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 141.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 141.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 140.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 139.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 138.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 137.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 137.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 136.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 136.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 136.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 136.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 135.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 135.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 135.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 135.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 133.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 132.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 132.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 132.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 132.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 132.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 130.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 130.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 129.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 129.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 129.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 128.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 128.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 127.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 127.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 126.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 126.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 125.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 124.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 121.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 119.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 119.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 118.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 116.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 116.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 115.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 114.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 114.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 114.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 114.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 113.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 112.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 112.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 111.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 111.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 111.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 111.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 110.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 108.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 107.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 106.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 106.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 106.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 105.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 104.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 103.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 102.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 102.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 101.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 100.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 100.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 99.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 96.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 96.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 94.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 94.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 92.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 92.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 91.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 89.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 89.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 88.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 87.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 86.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 86.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 85.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 84.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 83.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 82.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 81.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 81.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 80.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 80.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 79.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 78.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 78.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 78.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 77.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 75.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 74.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 73.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 73.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 72.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 71.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 71.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 68.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 67.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 67.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 67.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 64.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 63.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 63.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 63.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 62.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 61.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 60.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 56.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 56.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 56.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 55.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 53.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 52.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 50.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 49.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 49.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 47.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 46.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 43.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 40.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 40.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 36.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 32.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 31.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 30.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 99.6
Samples: 4

Max nTPM: 124.4
Min nTPM: 87.9
Sample A Female 124.4
Sample B Female 95.1
Sample C Male 91.0
Sample D Male 87.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

197.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 197.9
Samples: 4

Max nTPM: 213.6
Min nTPM: 180.9
Sample A Male 213.6
Sample B Male 204.2
Sample C Female 193.0
Sample D Female 180.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 16.3
73997147 Antisense, RP_051214_03_F06, Mouse strain C57BL/6J (56 days, male) 19.8
69782706 Antisense, RP_050505_03_E10, Mouse strain C57BL/6J (56 days, male) 12.9

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