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  • TNFRSF21
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:108.8 nTPM
HPA Brain:104.2 nTPM
GTEx:108.8 nTPM
FANTOM5:85.4 Scaled Tags Per Million
Pig:214.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 87.6
2816 Male, age 47, midline 110.4
2565 Male, age 75, midline 86.0
2194 Female, age 79, both hemispheres 85.7
1981 Female, age 72, midline 84.0
2048 Male, age 55, midline 71.7
Cervical spinal cord, dorsal horn
nTPM: 100.9
2296 Male, age 66, both hemispheres 229.3
2173 Female, age 72, unknown 118.0
2069 Male, age 47, both hemispheres 96.0
1877 Male, age 55, unknown 69.5
2721 Male, age 90, both hemispheres 50.8
2297 Male, age 75, both hemispheres 42.0
Cervical spinal cord, ventral horn
nTPM: 104.2
2480 Male, age 75, both hemispheres 150.8
2820 Female, age 79, both hemispheres 112.9
2098 Female, age 72, unknown 98.5
2068 Male, age 55, unknown 92.5
2295 Male, age 66, both hemispheres 86.8
2809 Male, age 90, both hemispheres 84.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 108.8
Samples: 204

Max nTPM: 256.6
Min nTPM: 12.6
Std nTPM: 45.1
Median nTPM: 106.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 256.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 236.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 233.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 228.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 227.9
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 211.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 206.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 206.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 197.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 189.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 185.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 185.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 184.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 184.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 180.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 180.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 173.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 173.7
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 172.9
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 171.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 170.1
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 162.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 161.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 160.5
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 159.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 159.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 158.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 158.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 157.5
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 156.3
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 155.5
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 155.3
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 155.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 154.4
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 154.0
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 152.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 148.9
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 148.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 147.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 147.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 146.6
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 144.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 143.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 142.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 142.0
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 141.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 141.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 139.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 139.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 139.0
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 136.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 136.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 136.8
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 135.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 134.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 132.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 132.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 131.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 131.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 129.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 128.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 126.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 124.7
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 124.0
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 123.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 122.8
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 122.5
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 121.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 121.2
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 118.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 118.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 117.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 117.3
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 116.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 116.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 115.8
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 115.7
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 115.3
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 114.1
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 113.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 113.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 113.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 112.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 112.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 112.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 111.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 111.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 110.5
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 110.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 110.2
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 110.2
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 109.8
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 109.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 109.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 109.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 109.0
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 108.6
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 107.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 107.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 107.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 107.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 107.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 105.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 105.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 104.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 104.5
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 104.4
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 104.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 103.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 103.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 102.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 101.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 99.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 99.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 98.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 98.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 98.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 97.7
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 97.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 97.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 96.2
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 96.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 94.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 93.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 93.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 92.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 92.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 88.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 88.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 88.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 87.6
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 87.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 87.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 87.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 85.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 85.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 85.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 84.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 83.9
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 83.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 83.2
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 82.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 81.9
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 81.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 80.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 80.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 79.7
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 79.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 78.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 78.7
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 78.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 78.1
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 78.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 78.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 77.4
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 77.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 76.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 75.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 75.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 74.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 74.3
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 73.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 72.9
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 69.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 68.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 67.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 67.7
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 67.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 65.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 64.9
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 63.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 62.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 62.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 61.3
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 61.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 60.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 57.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 57.1
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 55.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 54.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 54.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 54.0
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 53.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 52.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 51.8
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 51.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 51.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 50.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 50.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 50.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 49.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 49.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 48.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 46.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 43.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 41.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 38.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 37.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 35.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 34.7
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 31.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 23.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 21.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 12.6
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

85.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 85.4
FF:10181-103D1 60 years, female 100.1
FF:10159-103A6 76 years, female 70.7

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

214.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 149.2
Samples: 4

Max nTPM: 211.4
Min nTPM: 87.0
Sample A Female 208.9
Sample B Female 89.3
Sample C Male 87.0
Sample D Male 211.4
Ventral spinal cord
nTPM: 214.3
Samples: 4

Max nTPM: 332.0
Min nTPM: 111.2
Sample A Female 296.9
Sample B Female 111.2
Sample C Male 117.0
Sample D Male 332.0

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