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  • SUMMARY

  • TISSUE

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  • NTRK2
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:22.4 nTPM
HPA Brain:529.1 nTPM
GTEx:22.4 nTPM
Pig:257.2 nTPM
Mouse:341.6 nTPM
Allen mouse:14.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

529.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 352.0
1961 Female, age 42, unknown 361.1
2226 Male, age 75, left hemisphere 342.9
Dorsomedial nucleus
nTPM: 402.6
1989 Male, age 62, unknown 463.4
2017 Female, age 42, unknown 377.7
2041 Female, age 72, unknown 366.6
Lateral hypothalamic area
nTPM: 289.8
1791 Male, age 80, right hemisphere 452.7
2412 Male, age 62, unknown 294.3
2271 Male, age 75, both hemispheres 223.1
2228 Male, age 66, unknown 189.0
Mammillary body
nTPM: 279.6
1945 Male, age 80, right hemisphere 352.2
1834 Female, age 42, unknown 312.3
1923 Female, age 72, unknown 263.1
2413 Male, age 66, unknown 244.0
1948 Female, age 72, unknown 226.6
Paraventricular nucleus
nTPM: 291.3
2700 Male, age 62, unknown 291.3
Preoptic area
nTPM: 375.6
1861 Female, age 42, unknown 436.2
1907 Male, age 80, right hemisphere 388.9
2414 Female, age 72, unknown 301.8
Supraoptic nucleus
nTPM: 529.1
2043 Male, age 62, unknown 641.8
1894 Female, age 72, unknown 577.0
2835 Female, age 72, unknown 368.4
Ventromedial nucleus
nTPM: 376.5
1822 Female, age 42, unknown 400.7
1982 Female, age 72, unknown 352.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 22.4
Samples: 257

Max nTPM: 64.6
Min nTPM: 4.8
Std nTPM: 10.7
Median nTPM: 19.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 64.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 60.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 58.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 55.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 52.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 52.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 49.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 48.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 47.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 46.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 46.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 44.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 43.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 43.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 43.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 42.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 41.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 41.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 40.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 40.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 40.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 40.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 39.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 37.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 36.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 36.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 36.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 36.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 36.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 36.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 35.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 35.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 35.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 34.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 34.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 34.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 34.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 33.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 33.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 32.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 32.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 32.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 31.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 31.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 31.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 31.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 31.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 31.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 30.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 30.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 30.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 30.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 29.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 29.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 29.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 29.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 29.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 29.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 29.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 29.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 28.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 28.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 28.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 28.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 27.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 27.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 27.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 27.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 27.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 27.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 27.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 27.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 26.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 26.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 26.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 26.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 25.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 25.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 25.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 25.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 25.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 25.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 25.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 25.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 24.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 24.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 24.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 24.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 24.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 24.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 24.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 24.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 24.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 24.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 23.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 23.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 23.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 23.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 23.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 23.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 23.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 23.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 23.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 23.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 22.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 22.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 22.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 22.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 22.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 21.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 21.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 21.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 21.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 21.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 21.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 21.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 21.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 21.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 20.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 20.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 20.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 20.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 20.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 20.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 20.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 20.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 20.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 19.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 19.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 19.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 19.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 19.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 19.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 19.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 19.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 19.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 19.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 18.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 18.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 18.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 18.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 18.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 18.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 18.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 18.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 18.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 18.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 18.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 17.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 17.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 17.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 17.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 17.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 17.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 17.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 17.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 17.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 17.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 17.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 16.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 16.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 16.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 16.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 16.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 16.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 16.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 16.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 16.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 16.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 16.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 16.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 16.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 16.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 16.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 16.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 16.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 15.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 15.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 15.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 15.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 15.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 15.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 15.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 15.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 15.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 15.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 15.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 14.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 14.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 14.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 14.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 14.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 14.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 14.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 14.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 14.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 14.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 14.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 14.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 14.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 14.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 13.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 13.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 13.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 13.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 13.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 13.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 13.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 13.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 13.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 13.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 13.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 12.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 12.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 12.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 12.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 12.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 12.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 12.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 12.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 12.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 12.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 12.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 12.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 12.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 12.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 12.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 12.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 12.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 12.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 11.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 11.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 11.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 11.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 11.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 11.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 10.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 10.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 10.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 10.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 10.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 10.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 10.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 10.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 10.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 9.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 9.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 9.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 9.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 8.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 8.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 8.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 8.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 8.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 7.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 5.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 4.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

257.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 257.2
Samples: 4

Max nTPM: 286.0
Min nTPM: 213.8
Sample A Female 277.7
Sample B Female 286.0
Sample C Male 251.3
Sample D Male 213.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

341.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 341.6
Samples: 4

Max nTPM: 367.4
Min nTPM: 313.6
Sample A Male 313.6
Sample B Male 367.4
Sample C Female 341.4
Sample D Female 343.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.7
79360318 Antisense, RP_071018_02_A09, Mouse strain C57BL/6J (56 days, male) 17.7
747 Antisense, RP_Baylor_253946, Mouse strain C57BL/6J (56 days, male) 11.7
746 Antisense, RP_Baylor_253946, Mouse strain C57BL/6J (56 days, male) 4.7

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