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TISSUE KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Kidney
Tissue proteome
Kidney
Tissue methods
KIDNEY - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1399.4 nTPM
HPA:461.5 nTPM
GTEx:1399.4 nTPM
FANTOM5:59.7 Scaled Tags Per Million
KIDNEY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

KIDNEY - Annotated protein expression
Pending normal tissue analysis

KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

461.5
overview
Female, age 58
Kidney sample 55
nTPM: 350.9
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 376.5
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 298.1
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 433.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 408.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 498.8
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 905.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 438.2
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 442.6
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1399.4
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 1337.4
Samples: 104

Max nTPM: 2732.7
Min nTPM: 819.8
Std nTPM: 364.7
Median nTPM: 1233.7
GTEX-15DCD-1926-SM-HAV33 70-79 years, female 2732.7
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 2560.5
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 2469.4
GTEX-O5YV-1226-SM-EV795 60-69 years, female 2215.1
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 2099.2
GTEX-1O9I2-1926-SM-F2TBQ 50-59 years, male 1961.9
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 1946.8
GTEX-WL46-1926-SM-GNIN6 50-59 years, male 1932.9
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 1925.0
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 1911.8
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 1868.2
GTEX-1JJE9-1026-SM-HL9TH 70-79 years, male 1847.0
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 1780.9
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 1719.3
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 1713.5
GTEX-1LH75-1326-SM-F2I1R 50-59 years, female 1679.9
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 1666.1
GTEX-1117F-2126-SM-GIN9G 60-69 years, female 1643.7
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 1628.2
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 1622.8
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 1565.1
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 1556.1
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 1549.4
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 1524.7
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 1523.2
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 1504.8
GTEX-QDVN-1726-SM-HL9TO 50-59 years, male 1494.2
GTEX-1QAET-2126-SM-F2TBS 50-59 years, male 1488.2
GTEX-16XZY-1026-SM-HAV39 70-79 years, male 1483.2
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 1437.7
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 1435.9
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 1418.3
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 1397.9
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 1395.1
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 1380.8
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 1368.1
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 1348.3
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 1329.3
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 1321.4
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 1320.9
GTEX-1RQEC-2426-SM-F2I1J 60-69 years, male 1305.0
GTEX-14PJ2-1826-SM-HL9UB 50-59 years, male 1299.9
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 1283.0
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 1281.1
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 1279.4
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 1279.1
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 1250.6
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 1250.6
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 1243.5
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 1242.8
GTEX-13FHP-2126-SM-GIN8J 50-59 years, male 1240.2
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 1237.9
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 1229.6
GTEX-W5X1-1626-SM-H7OGO 40-49 years, female 1224.2
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 1222.7
GTEX-14JG1-2326-SM-HAUZ5 40-49 years, male 1220.4
GTEX-13112-2126-SM-5GCO4 50-59 years, male 1211.7
GTEX-16XZZ-2226-SM-HAV34 60-69 years, male 1202.7
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 1193.8
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 1192.9
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 1180.3
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 1180.0
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 1173.3
GTEX-1ICLY-2026-SM-GA913 50-59 years, male 1169.8
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 1164.1
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 1163.9
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 1163.8
GTEX-14C39-2126-SM-664OH 40-49 years, male 1159.9
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 1157.0
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 1152.6
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 1145.8
GTEX-1HCVE-2126-SM-HL9UO 50-59 years, male 1145.4
GTEX-13O3O-1726-SM-GJ3RL 60-69 years, female 1141.2
GTEX-ZXG5-2026-SM-HAUZV 60-69 years, male 1139.7
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 1130.4
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 1115.7
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 1093.5
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 1089.4
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 1084.2
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 1082.1
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 1081.1
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 1080.1
GTEX-12696-0926-SM-5FQTV 60-69 years, male 1077.6
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 1046.3
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 1045.0
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 1035.2
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 1031.6
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 1028.7
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 1024.3
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 1013.7
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 1006.0
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 994.2
GTEX-16Z82-2826-SM-HAUZZ 60-69 years, male 979.9
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 976.1
GTEX-RN64-1626-SM-48FD7 50-59 years, male 964.3
GTEX-NFK9-1826-SM-HL9T3 40-49 years, male 960.1
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 959.9
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 954.8
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 954.5
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 930.9
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 927.1
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 863.9
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 840.3
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 819.8
Show allShow less
Kidney - Medulla
Average nTPM: 1399.4
Samples: 11

Max nTPM: 3149.5
Min nTPM: 864.2
Std nTPM: 657.7
Median nTPM: 1163.7
GTEX-N7MS-1526-SM-HAUZP 60-69 years, male 3149.5
GTEX-QEG5-2026-SM-H6Q6I 20-29 years, male 2241.6
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 1381.6
GTEX-SIU8-1926-SM-H7OG4 50-59 years, male 1274.7
GTEX-T6MN-1926-SM-GOQYD 50-59 years, male 1221.3
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 1163.7
GTEX-QEG4-1526-SM-GPRWK 30-39 years, male 1132.5
GTEX-P4QS-1226-SM-HPAG8 60-69 years, male 1069.8
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 1013.0
GTEX-S33H-1526-SM-GQ1CB 30-39 years, male 881.1
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 864.2
Show allShow less

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

59.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 59.7
FF:10017-101C8 60,62,63 years, female 59.7

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