We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
COMMD3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • COMMD3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:31.0 nTPM
HPA Brain:21.0 nTPM
GTEx:31.0 nTPM
Pig:55.6 nTPM
Mouse:74.8 nTPM
Allen mouse:6.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 17.5
2226 Male, age 75, left hemisphere 19.6
1961 Female, age 42, unknown 15.4
Dorsomedial nucleus
nTPM: 14.5
2041 Female, age 72, unknown 15.4
1989 Male, age 62, unknown 14.5
2017 Female, age 42, unknown 13.7
Lateral hypothalamic area
nTPM: 19.6
2271 Male, age 75, both hemispheres 25.2
1791 Male, age 80, right hemisphere 21.0
2228 Male, age 66, unknown 19.9
2412 Male, age 62, unknown 12.2
Mammillary body
nTPM: 21.0
1923 Female, age 72, unknown 28.9
1948 Female, age 72, unknown 20.2
2413 Male, age 66, unknown 19.4
1945 Male, age 80, right hemisphere 18.9
1834 Female, age 42, unknown 17.8
Paraventricular nucleus
nTPM: 15.3
2700 Male, age 62, unknown 15.3
Preoptic area
nTPM: 15.1
2414 Female, age 72, unknown 16.3
1907 Male, age 80, right hemisphere 15.5
1861 Female, age 42, unknown 13.7
Supraoptic nucleus
nTPM: 20.8
1894 Female, age 72, unknown 28.7
2043 Male, age 62, unknown 19.4
2835 Female, age 72, unknown 14.3
Ventromedial nucleus
nTPM: 14.4
1982 Female, age 72, unknown 16.2
1822 Female, age 42, unknown 12.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 31.0
Samples: 257

Max nTPM: 71.4
Min nTPM: 16.6
Std nTPM: 7.1
Median nTPM: 29.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 71.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 60.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 60.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 53.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 48.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 48.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 46.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 45.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 44.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 44.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 44.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 44.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 43.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 42.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 42.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 41.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 41.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 41.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 41.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 41.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 41.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 41.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 40.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 40.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 40.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 40.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 40.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 39.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 39.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 39.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 38.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 38.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 38.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 38.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 38.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 37.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 37.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 37.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 37.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 37.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 37.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 37.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 36.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 36.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 36.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 36.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 36.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 36.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 36.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 36.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 35.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 35.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 35.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 35.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 35.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 35.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 35.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 34.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 34.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 34.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 34.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 34.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 34.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 34.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 33.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 33.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 33.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 33.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 33.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 33.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 33.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 33.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 33.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 33.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 33.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 33.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 32.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 32.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 32.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 32.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 32.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 32.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 32.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 32.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 32.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 32.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 32.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 32.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 32.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 32.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 32.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 32.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 31.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 31.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 31.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 31.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 31.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 31.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 31.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 31.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 31.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 31.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 31.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 31.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 31.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 31.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 30.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 30.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 30.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 30.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 30.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 30.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 30.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 30.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 30.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 30.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 30.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 30.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 30.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 30.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 30.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 30.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 30.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 30.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 30.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 29.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 29.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 29.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 29.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 29.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 29.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 29.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 29.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 29.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 29.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 29.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 29.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 28.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 28.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 28.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 28.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 28.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 28.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 28.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 28.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 28.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 28.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 28.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 28.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 28.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 28.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 28.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 28.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 28.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 28.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 28.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 28.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 28.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 28.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 28.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 28.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 28.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 28.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 28.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 28.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 27.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 27.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 27.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 27.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 27.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 27.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 27.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 27.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 27.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 27.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 27.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 27.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 27.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 27.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 27.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 27.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 27.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 27.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 27.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 27.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 27.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 27.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 27.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 27.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 27.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 27.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 27.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 27.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 27.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 27.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 27.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 27.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 27.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 26.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 26.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 26.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 26.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 26.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 26.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 26.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 26.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 26.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 26.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 26.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 26.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 26.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 25.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 25.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 25.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 25.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 25.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 25.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 24.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 24.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 24.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 24.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 24.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 24.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 24.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 24.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 24.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 24.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 23.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 23.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 23.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 23.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 23.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 23.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 23.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 23.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 23.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 23.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 23.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 22.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 22.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 22.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 22.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 22.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 21.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 21.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 20.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 20.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 20.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 20.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 20.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 20.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 19.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 19.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 19.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 19.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 18.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 16.6
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 55.6
Samples: 4

Max nTPM: 65.0
Min nTPM: 47.4
Sample A Female 65.0
Sample B Female 60.0
Sample C Male 49.9
Sample D Male 47.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 74.9
Samples: 4

Max nTPM: 80.9
Min nTPM: 69.6
Sample A Male 76.6
Sample B Male 80.9
Sample C Female 69.6
Sample D Female 72.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.0
69262340 Antisense, RP_050303_02_B10, Mouse strain C57BL/6J (56 days, male) 6.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo