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FAM171A1
HPA
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  • TISSUE

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  • FAM171A1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:35.7 nTPM
HPA Brain:83.4 nTPM
GTEx:35.7 nTPM
Pig:25.3 nTPM
Mouse:28.4 nTPM
Allen mouse:0.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 65.5
1961 Female, age 42, unknown 73.8
2226 Male, age 75, left hemisphere 57.3
Dorsomedial nucleus
nTPM: 79.0
1989 Male, age 62, unknown 96.3
2017 Female, age 42, unknown 78.6
2041 Female, age 72, unknown 62.1
Lateral hypothalamic area
nTPM: 66.2
2271 Male, age 75, both hemispheres 83.1
1791 Male, age 80, right hemisphere 71.2
2228 Male, age 66, unknown 55.4
2412 Male, age 62, unknown 55.2
Mammillary body
nTPM: 77.6
1945 Male, age 80, right hemisphere 86.1
1834 Female, age 42, unknown 81.0
1948 Female, age 72, unknown 76.7
2413 Male, age 66, unknown 75.3
1923 Female, age 72, unknown 69.1
Paraventricular nucleus
nTPM: 63.9
2700 Male, age 62, unknown 63.9
Preoptic area
nTPM: 72.3
2414 Female, age 72, unknown 82.7
1861 Female, age 42, unknown 74.6
1907 Male, age 80, right hemisphere 59.6
Supraoptic nucleus
nTPM: 80.5
2043 Male, age 62, unknown 93.4
1894 Female, age 72, unknown 84.1
2835 Female, age 72, unknown 64.1
Ventromedial nucleus
nTPM: 83.4
1982 Female, age 72, unknown 89.1
1822 Female, age 42, unknown 77.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 35.7
Samples: 257

Max nTPM: 84.7
Min nTPM: 13.6
Std nTPM: 10.9
Median nTPM: 34.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 84.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 84.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 78.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 74.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 72.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 68.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 68.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 67.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 66.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 64.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 61.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 56.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 55.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 54.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 52.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 52.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 50.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 50.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 50.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 50.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 49.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 48.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 48.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 47.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 46.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 46.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 46.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 46.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 46.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 44.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 44.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 44.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 44.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 44.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 44.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 43.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 43.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 43.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 43.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 43.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 43.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 43.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 43.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 42.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 42.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 42.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 42.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 42.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 42.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 41.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 41.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 41.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 41.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 41.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 41.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 41.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 41.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 40.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 40.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 40.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 40.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 40.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 40.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 40.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 39.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 39.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 39.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 39.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 39.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 39.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 39.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 39.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 38.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 38.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 38.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 38.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 38.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 38.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 37.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 37.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 37.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 37.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 37.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 37.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 37.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 37.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 37.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 37.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 37.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 37.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 37.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 36.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 36.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 36.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 36.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 36.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 36.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 36.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 36.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 36.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 36.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 36.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 36.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 36.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 36.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 36.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 36.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 36.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 36.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 36.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 36.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 35.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 35.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 35.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 35.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 35.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 35.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 35.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 35.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 35.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 35.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 35.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 35.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 35.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 35.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 35.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 34.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 34.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 34.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 34.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 34.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 34.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 34.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 34.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 34.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 33.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 33.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 33.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 33.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 33.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 33.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 33.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 33.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 33.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 33.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 33.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 33.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 33.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 33.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 32.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 32.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 32.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 32.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 32.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 32.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 32.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 32.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 32.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 31.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 31.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 31.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 31.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 31.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 31.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 31.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 31.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 31.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 31.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 31.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 31.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 31.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 31.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 31.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 31.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 30.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 30.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 30.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 30.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 30.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 30.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 30.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 30.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 30.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 29.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 29.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 29.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 29.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 29.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 29.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 29.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 29.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 28.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 28.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 28.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 28.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 28.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 28.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 28.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 28.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 28.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 28.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 27.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 27.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 27.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 27.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 27.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 27.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 27.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 27.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 27.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 27.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 27.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 27.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 27.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 27.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 27.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 26.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 26.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 26.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 26.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 25.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 25.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 25.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 25.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 25.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 24.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 24.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 24.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 24.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 24.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 23.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 23.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 23.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 23.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 23.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 22.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 22.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 22.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 22.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 22.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 22.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 22.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 22.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 22.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 22.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 22.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 21.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 21.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 20.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 20.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 20.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 18.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 18.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 18.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 18.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 18.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 13.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 25.3
Samples: 4

Max nTPM: 31.0
Min nTPM: 19.3
Sample A Female 31.0
Sample B Female 26.0
Sample C Male 25.0
Sample D Male 19.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 28.4
Samples: 4

Max nTPM: 28.7
Min nTPM: 27.5
Sample A Male 28.5
Sample B Male 28.7
Sample C Female 27.5
Sample D Female 28.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.3
69447822 Antisense, RP_050419_02_B06, Mouse strain C57BL/6J (56 days, male) 0.5
72283797 Antisense, RP_051027_01_B03, Mouse strain C57BL/6J (56 days, male) 0.0

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