We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CSTPP1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CSTPP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:44.5 nTPM
HPA Brain:52.3 nTPM
GTEx:44.5 nTPM
Pig:29.1 nTPM
Mouse:105.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 52.3
2226 Male, age 75, left hemisphere 57.2
1961 Female, age 42, unknown 47.4
Dorsomedial nucleus
nTPM: 47.1
1989 Male, age 62, unknown 58.7
2041 Female, age 72, unknown 51.1
2017 Female, age 42, unknown 31.5
Lateral hypothalamic area
nTPM: 43.9
1791 Male, age 80, right hemisphere 59.4
2228 Male, age 66, unknown 51.6
2271 Male, age 75, both hemispheres 34.0
2412 Male, age 62, unknown 30.6
Mammillary body
nTPM: 43.2
1923 Female, age 72, unknown 67.2
1948 Female, age 72, unknown 43.2
1945 Male, age 80, right hemisphere 37.1
2413 Male, age 66, unknown 36.1
1834 Female, age 42, unknown 32.5
Paraventricular nucleus
nTPM: 38.4
2700 Male, age 62, unknown 38.4
Preoptic area
nTPM: 38.2
1907 Male, age 80, right hemisphere 50.5
1861 Female, age 42, unknown 35.5
2414 Female, age 72, unknown 28.4
Supraoptic nucleus
nTPM: 41.2
1894 Female, age 72, unknown 50.0
2835 Female, age 72, unknown 38.5
2043 Male, age 62, unknown 35.2
Ventromedial nucleus
nTPM: 51.7
1982 Female, age 72, unknown 59.7
1822 Female, age 42, unknown 43.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 44.5
Samples: 257

Max nTPM: 77.1
Min nTPM: 9.7
Std nTPM: 13.5
Median nTPM: 45.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 77.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 75.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 73.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 72.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 69.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 69.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 68.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 68.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 67.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 67.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 66.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 65.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 65.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 64.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 64.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 63.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 62.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 62.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 62.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 62.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 62.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 62.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 62.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 61.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 61.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 61.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 61.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 61.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 61.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 61.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 61.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 61.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 60.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 60.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 60.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 59.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 59.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 59.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 59.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 58.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 58.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 58.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 58.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 58.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 58.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 57.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 57.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 57.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 57.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 57.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 57.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 57.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 57.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 56.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 56.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 56.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 56.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 56.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 55.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 55.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 55.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 55.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 55.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 55.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 55.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 55.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 54.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 54.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 54.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 54.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 54.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 53.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 53.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 53.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 53.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 53.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 52.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 52.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 52.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 52.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 52.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 51.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 51.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 51.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 51.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 51.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 51.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 51.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 51.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 50.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 50.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 50.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 50.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 50.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 50.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 50.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 50.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 50.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 49.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 49.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 49.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 49.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 49.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 49.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 49.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 49.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 48.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 48.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 48.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 48.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 47.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 47.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 47.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 47.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 47.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 47.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 47.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 47.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 46.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 46.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 46.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 46.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 46.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 46.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 46.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 45.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 45.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 45.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 45.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 45.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 45.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 45.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 44.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 44.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 44.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 43.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 43.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 43.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 43.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 42.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 42.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 42.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 42.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 42.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 42.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 42.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 42.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 42.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 41.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 41.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 41.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 41.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 41.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 41.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 40.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 40.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 40.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 40.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 40.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 40.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 40.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 39.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 39.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 39.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 38.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 38.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 38.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 38.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 37.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 37.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 37.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 37.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 37.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 37.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 37.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 37.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 36.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 36.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 36.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 36.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 36.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 36.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 36.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 35.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 35.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 35.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 35.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 34.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 34.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 34.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 34.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 34.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 34.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 33.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 33.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 33.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 33.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 33.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 33.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 33.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 33.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 33.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 32.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 32.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 32.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 32.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 32.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 32.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 32.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 31.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 31.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 31.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 31.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 31.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 31.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 31.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 31.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 30.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 30.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 30.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 29.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 29.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 29.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 28.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 28.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 28.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 28.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 27.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 27.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 27.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 27.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 26.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 26.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 25.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 25.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 25.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 25.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 24.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 24.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 23.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 23.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 22.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 21.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 21.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 21.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 20.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 19.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 19.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 17.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 16.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 15.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 14.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 12.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 11.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 11.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 9.7
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 29.1
Samples: 4

Max nTPM: 36.7
Min nTPM: 24.2
Sample A Female 36.7
Sample B Female 26.4
Sample C Male 29.1
Sample D Male 24.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 105.6
Samples: 4

Max nTPM: 113.6
Min nTPM: 96.7
Sample A Male 100.7
Sample B Male 113.6
Sample C Female 111.3
Sample D Female 96.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo