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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • DRD2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

150.314
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:10.8 nTPM
HPA Brain:30.7 nTPM
GTEx:10.8 nTPM
Pig:11.2 nTPM
Mouse:13.6 nTPM
Allen mouse:1.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA015139
Hypothalamus mean intensity 150.314
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 9.389
Mammillary nucleus 7.462
Periventricular hypothalamic nucleus 65.212
Supraoptic nucleus 14.770
Tuberal nucleus 8.697
Ventral tuberomammillary nucleus -
Lateral preoptic area 9.535
Medial preoptic area 6.567
Suprachiasmatic nucleus 12.371
Paraventricular hypothalamic nucleus 34.310
Anterior hypothalamic area, central 14.358
Ventral medial hypothalamic nucleus 10.078
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 150.314
Arcuate nucleus* -
Peduncular part of lateral hypothalmus -
Dorsal medial hypothalamic nucleus 20.557
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 8.3
1961 Female, age 42, unknown 11.1
2226 Male, age 75, left hemisphere 5.5
Dorsomedial nucleus
nTPM: 18.4
1989 Male, age 62, unknown 26.3
2041 Female, age 72, unknown 19.5
2017 Female, age 42, unknown 9.5
Lateral hypothalamic area
nTPM: 30.7
2271 Male, age 75, both hemispheres 58.3
1791 Male, age 80, right hemisphere 35.8
2412 Male, age 62, unknown 14.6
2228 Male, age 66, unknown 14.3
Mammillary body
nTPM: 5.5
1948 Female, age 72, unknown 8.8
2413 Male, age 66, unknown 7.2
1945 Male, age 80, right hemisphere 6.0
1834 Female, age 42, unknown 3.4
1923 Female, age 72, unknown 1.8
Paraventricular nucleus
nTPM: 14.5
2700 Male, age 62, unknown 14.5
Preoptic area
nTPM: 15.6
2414 Female, age 72, unknown 19.6
1907 Male, age 80, right hemisphere 15.1
1861 Female, age 42, unknown 12.0
Supraoptic nucleus
nTPM: 7.0
2835 Female, age 72, unknown 9.5
2043 Male, age 62, unknown 6.0
1894 Female, age 72, unknown 5.6
Ventromedial nucleus
nTPM: 10.4
1822 Female, age 42, unknown 10.5
1982 Female, age 72, unknown 10.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 10.8
Samples: 257

Max nTPM: 70.4
Min nTPM: 0.5
Std nTPM: 10.0
Median nTPM: 7.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 70.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 68.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 53.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 48.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 44.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 42.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 40.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 37.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 36.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 33.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 29.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 29.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 28.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 26.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 26.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 26.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 25.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 25.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 25.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 25.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 24.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 24.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 24.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 23.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 23.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 22.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 22.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 22.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 22.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 21.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 21.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 20.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 20.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 20.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 20.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 19.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 19.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 18.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 18.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 18.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 18.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 17.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 17.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 16.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 16.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 16.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 16.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 16.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 16.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 16.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 16.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 16.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 15.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 15.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 15.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 15.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 14.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 14.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 14.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 14.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 13.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 13.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 13.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 13.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 13.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 12.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 12.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 12.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 12.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 12.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 12.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 12.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 12.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 12.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 12.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 11.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 11.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 11.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 11.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 11.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 11.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 11.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 11.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 11.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 11.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 11.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 11.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 11.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 10.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 10.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 10.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 10.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 10.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 10.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 10.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 10.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 9.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 9.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 9.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 9.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 9.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 9.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 9.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 9.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 9.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 9.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 9.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 9.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 8.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 8.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 8.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 8.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 8.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 8.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 8.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 8.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 8.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 8.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 8.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 8.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 8.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 8.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 8.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 8.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 8.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 8.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 7.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 7.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 7.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 7.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 7.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 7.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 7.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 7.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 7.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 7.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 7.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 7.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 7.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 7.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 7.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 7.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 7.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 7.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 6.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 6.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 6.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 6.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 6.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 6.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 6.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 6.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 6.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 6.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 6.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 6.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 6.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 6.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 6.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 6.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 5.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 5.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 5.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 5.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 5.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 5.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 5.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 5.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 5.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 5.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 5.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 5.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 5.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 5.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 5.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 5.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 5.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 5.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 5.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 5.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 5.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 5.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 5.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 4.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 4.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 4.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 4.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 4.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 4.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 4.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 4.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 4.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 4.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 4.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 4.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 4.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 4.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 4.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 4.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 4.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 4.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 4.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 4.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 4.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 4.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 4.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 4.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 4.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 4.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 4.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 3.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 3.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 3.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 3.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 3.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 3.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 3.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 3.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 3.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 3.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 3.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 3.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 3.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 3.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 3.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 3.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 3.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 3.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 3.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 3.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 3.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 3.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 3.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 3.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 3.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 3.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 3.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 2.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 2.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 2.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 2.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 2.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 2.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 2.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 2.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 2.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 2.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 0.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 0.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 0.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 11.3
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.6
Sample A Female 11.7
Sample B Female 11.3
Sample C Male 9.6
Sample D Male 12.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 13.6
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.1
Sample A Male 12.1
Sample B Male 13.2
Sample C Female 13.1
Sample D Female 16.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.0
357 Antisense, RP_Baylor_102735, Mouse strain C57BL/6J (56 days, male) 1.2
81790728 Antisense, RP_090820_05_A10, Mouse strain C57BL/6J (56 days, male) 0.9
358 Antisense, RP_Baylor_102735, Mouse strain C57BL/6J (56 days, male) 0.4

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