HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:43.8 nTPM
HPA Brain:22.8 nTPM
GTEx:43.8 nTPM
FANTOM5:12.8 Scaled Tags Per Million
Pig:3.2 nTPM
Mouse:7.3 nTPM
Allen mouse:4.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028910Antibody HPA073279
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 22.8
Sample id Sample description nTPM
Hippocampus
nTPM: 22.8
2529 Female, age 94, left hemisphere 25.2
2148 Female, age 91, left hemisphere 23.6
1898 Male, age 80, left hemisphere 23.1
1911 Female, age 85, right hemisphere 22.5
1855 Male, age 76, left hemisphere 21.8
2621 Female, age 67, right hemisphere 20.4
Dentate gyrus
nTPM: 20.3
2530 Female, age 94, left hemisphere 29.3
2528 Male, age 74, both hemispheres 24.1
2246 Female, age 85, both hemispheres 18.7
1927 Female, age 91, both hemispheres 18.5
2010 Male, age 76, both hemispheres 17.4
2531 Female, age 67, both hemispheres 13.8
Entorhinal gyrus
nTPM: 21.4
2117 Female, age 91, right hemisphere 31.5
2686 Male, age 75, right hemisphere 24.9
1787 Male, age 76, left hemisphere 20.7
2764 Male, age 80, right hemisphere 19.3
1938 Female, age 85, left hemisphere 17.1
2613 Female, age 94, left hemisphere 14.8
Hippocampus, CA1
nTPM: 19.5
1873 Female, age 85, both hemispheres 22.7
2527 Male, age 74, both hemispheres 20.2
2749 Male, age 80, left hemisphere 19.3
2082 Female, age 91, right hemisphere 18.9
2045 Male, age 76, both hemispheres 16.6
Hippocampus, CA2
nTPM: 21.5
2437 Female, age 94, left hemisphere 26.7
1963 Male, age 80, left hemisphere 25.4
1940 Female, age 85, left hemisphere 21.5
2249 Male, age 74, both hemispheres 19.9
2113 Female, age 91, right hemisphere 19.8
1892 Male, age 76, both hemispheres 15.8
Hippocampus, CA3
nTPM: 19.1
1891 Female, age 85, both hemispheres 22.5
2861 Female, age 67, both hemispheres 19.9
1867 Male, age 76, both hemispheres 18.8
2137 Male, age 80, left hemisphere 18.6
2620 Female, age 94, left hemisphere 17.4
2436 Male, age 74, both hemispheres 17.1
Parahippocampal cortex
nTPM: 18.3
2692 Male, age 74, both hemispheres 22.9
2622 Female, age 67, right hemisphere 21.9
2018 Male, age 76, both hemispheres 21.6
2250 Female, age 67, right hemisphere 18.9
1933 Female, age 85, both hemispheres 17.8
2245 Female, age 91, both hemispheres 17.5
1990 Female, age 91, right hemisphere 17.1
2693 Female, age 94, both hemispheres 16.0
1850 Male, age 80, both hemispheres 14.6
2532 Female, age 72, left hemisphere 14.3
Perirhinal gyrus
nTPM: 14.9
2521 Female, age 94, right hemisphere 16.4
2848 Male, age 76, right hemisphere 15.5
1847 Female, age 91, left hemisphere 15.4
1841 Female, age 85, right hemisphere 14.3
1794 Male, age 80, right hemisphere 12.8
Subiculum
nTPM: 22.7
2042 Male, age 76, both hemispheres 29.7
2729 Female, age 91, right hemisphere 25.0
2619 Male, age 74, both hemispheres 22.6
2438 Female, age 94, left hemisphere 20.6
1901 Male, age 80, both hemispheres 19.7
1977 Female, age 85, both hemispheres 18.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 43.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.8
Samples: 255

Max nTPM: 172.1
Min nTPM: 15.4
Std nTPM: 16.3
Median nTPM: 40.8
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 172.1
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 120.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 99.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 94.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 85.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 79.2
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 77.1
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 76.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 75.3
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 74.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 70.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 12.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.8
FF:10153-102I9 76 years, female 14.2
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 3.2
Pig sample Sample description nTPM
Subiculum
nTPM: 2.4
Samples: 4

Max nTPM: 2.6
Min nTPM: 2.0
Sample A Female 2.0
Sample B Female 2.4
Sample C Male 2.4
Sample D Male 2.6
Dorsal hippocampus
nTPM: 3.3
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.6
Sample A Female 3.4
Sample B Female 2.8
Sample C Male 4.2
Sample D Male 2.6
Entorhinal cortex
nTPM: 2.4
Samples: 4

Max nTPM: 2.5
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 2.5
Sample C Male 2.5
Sample D Male 2.3
Ventral hippocampus
nTPM: 3.1
Samples: 4

Max nTPM: 3.2
Min nTPM: 3.0
Sample A Female 3.1
Sample B Female 3.1
Sample C Male 3.2
Sample D Male 3.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 7.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 11.5
Min nTPM: 4.1
Sample A Male 11.5
Sample B Male 8.0
Sample C Female 5.6
Sample D Female 4.1
Hippocampal formation
nTPM: 5.6
Samples: 4

Max nTPM: 6.9
Min nTPM: 4.5
Sample A Male 5.2
Sample B Male 5.7
Sample C Female 4.5
Sample D Female 6.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
68443363 Antisense, RP_050111_01_H02, Mouse strain C57BL/6J (56 days, male) 4.2

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