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  • TISSUE

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  • FEZ1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:84.2 nTPM
HPA Brain:173.1 nTPM
GTEx:84.2 nTPM
Pig:130.7 nTPM
Mouse:304.3 nTPM
Allen mouse:18.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 90.8
2226 Male, age 75, left hemisphere 99.9
1961 Female, age 42, unknown 81.7
Dorsomedial nucleus
nTPM: 99.6
2017 Female, age 42, unknown 117.0
1989 Male, age 62, unknown 94.5
2041 Female, age 72, unknown 87.4
Lateral hypothalamic area
nTPM: 120.9
2228 Male, age 66, unknown 140.6
2271 Male, age 75, both hemispheres 129.5
1791 Male, age 80, right hemisphere 124.1
2412 Male, age 62, unknown 89.5
Mammillary body
nTPM: 173.1
1948 Female, age 72, unknown 202.0
1923 Female, age 72, unknown 191.2
1834 Female, age 42, unknown 183.9
1945 Male, age 80, right hemisphere 166.2
2413 Male, age 66, unknown 122.4
Paraventricular nucleus
nTPM: 123.6
2700 Male, age 62, unknown 123.6
Preoptic area
nTPM: 121.2
2414 Female, age 72, unknown 141.7
1861 Female, age 42, unknown 123.5
1907 Male, age 80, right hemisphere 98.4
Supraoptic nucleus
nTPM: 126.9
2043 Male, age 62, unknown 158.0
1894 Female, age 72, unknown 120.4
2835 Female, age 72, unknown 102.3
Ventromedial nucleus
nTPM: 85.3
1982 Female, age 72, unknown 94.3
1822 Female, age 42, unknown 76.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 84.2
Samples: 257

Max nTPM: 347.1
Min nTPM: 25.9
Std nTPM: 48.2
Median nTPM: 68.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 347.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 306.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 259.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 242.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 225.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 219.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 214.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 214.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 205.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 199.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 195.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 194.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 190.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 187.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 185.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 182.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 178.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 176.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 176.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 172.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 168.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 167.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 162.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 152.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 150.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 148.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 142.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 139.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 135.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 131.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 130.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 129.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 127.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 127.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 126.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 126.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 126.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 125.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 124.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 123.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 119.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 118.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 118.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 118.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 117.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 117.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 116.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 116.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 115.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 113.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 112.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 112.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 111.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 111.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 110.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 108.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 107.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 106.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 106.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 104.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 102.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 102.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 100.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 99.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 98.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 97.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 95.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 94.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 94.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 94.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 93.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 93.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 92.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 91.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 91.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 91.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 90.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 89.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 89.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 88.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 88.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 88.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 87.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 85.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 84.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 82.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 82.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 82.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 80.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 79.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 78.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 77.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 77.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 77.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 77.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 76.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 76.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 76.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 75.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 75.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 74.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 74.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 74.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 74.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 74.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 73.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 73.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 73.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 72.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 72.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 72.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 71.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 71.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 71.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 70.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 70.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 70.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 70.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 70.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 70.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 70.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 70.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 69.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 69.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 69.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 69.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 69.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 69.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 68.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 68.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 68.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 67.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 67.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 67.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 67.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 67.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 66.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 65.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 64.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 64.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 64.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 64.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 63.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 63.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 63.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 63.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 63.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 62.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 62.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 62.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 61.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 61.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 61.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 61.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 61.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 60.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 60.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 60.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 59.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 59.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 59.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 59.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 58.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 58.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 58.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 57.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 57.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 57.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 57.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 57.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 56.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 56.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 56.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 56.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 56.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 56.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 56.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 56.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 55.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 55.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 55.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 55.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 55.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 55.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 55.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 55.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 55.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 54.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 54.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 54.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 54.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 53.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 53.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 53.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 53.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 53.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 53.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 53.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 52.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 52.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 52.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 52.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 52.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 51.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 51.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 51.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 51.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 50.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 50.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 50.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 50.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 49.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 49.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 49.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 49.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 49.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 48.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 48.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 48.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 48.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 47.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 47.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 47.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 46.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 46.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 46.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 46.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 46.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 45.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 45.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 45.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 45.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 45.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 45.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 45.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 44.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 44.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 44.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 44.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 44.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 44.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 43.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 43.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 42.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 42.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 41.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 41.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 40.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 39.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 36.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 35.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 34.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 34.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 34.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 33.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 27.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 25.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 130.7
Samples: 4

Max nTPM: 154.1
Min nTPM: 79.7
Sample A Female 154.1
Sample B Female 146.7
Sample C Male 142.2
Sample D Male 79.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

304.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 304.3
Samples: 4

Max nTPM: 323.9
Min nTPM: 275.8
Sample A Male 275.8
Sample B Male 309.3
Sample C Female 323.9
Sample D Female 308.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.7
68632051 Antisense, RP_050125_01_F03, Mouse strain C57BL/6J (56 days, male) 18.7

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