HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:25.4 nTPM
HPA Brain:33.4 nTPM
GTEx:25.4 nTPM
FANTOM5:18.6 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:20.9 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030691
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.4
Sample id Sample description nTPM
Hippocampus
nTPM: 29.1
1898 Male, age 80, left hemisphere 43.3
2529 Female, age 94, left hemisphere 30.1
1855 Male, age 76, left hemisphere 28.7
2621 Female, age 67, right hemisphere 27.4
1911 Female, age 85, right hemisphere 24.9
2148 Female, age 91, left hemisphere 20.3
Dentate gyrus
nTPM: 29.9
2530 Female, age 94, left hemisphere 49.7
2010 Male, age 76, both hemispheres 38.2
2528 Male, age 74, both hemispheres 29.9
2246 Female, age 85, both hemispheres 23.4
1927 Female, age 91, both hemispheres 22.8
2531 Female, age 67, both hemispheres 15.1
Entorhinal gyrus
nTPM: 27.6
2764 Male, age 80, right hemisphere 31.6
1787 Male, age 76, left hemisphere 28.8
2117 Female, age 91, right hemisphere 28.8
2613 Female, age 94, left hemisphere 27.4
1938 Female, age 85, left hemisphere 27.2
2686 Male, age 75, right hemisphere 21.6
Hippocampus, CA1
nTPM: 30.6
2749 Male, age 80, left hemisphere 51.9
1873 Female, age 85, both hemispheres 34.4
2527 Male, age 74, both hemispheres 24.0
2045 Male, age 76, both hemispheres 23.9
2082 Female, age 91, right hemisphere 18.9
Hippocampus, CA2
nTPM: 33.4
1963 Male, age 80, left hemisphere 52.8
2249 Male, age 74, both hemispheres 38.4
1892 Male, age 76, both hemispheres 34.4
2437 Female, age 94, left hemisphere 32.6
2113 Female, age 91, right hemisphere 22.4
1940 Female, age 85, left hemisphere 19.8
Hippocampus, CA3
nTPM: 24.7
2436 Male, age 74, both hemispheres 46.3
1891 Female, age 85, both hemispheres 25.0
2137 Male, age 80, left hemisphere 23.8
1867 Male, age 76, both hemispheres 22.3
2861 Female, age 67, both hemispheres 17.4
2620 Female, age 94, left hemisphere 13.2
Parahippocampal cortex
nTPM: 24.0
1933 Female, age 85, both hemispheres 29.4
2532 Female, age 72, left hemisphere 26.5
2250 Female, age 67, right hemisphere 24.9
1850 Male, age 80, both hemispheres 24.8
1990 Female, age 91, right hemisphere 24.3
2693 Female, age 94, both hemispheres 24.2
2245 Female, age 91, both hemispheres 23.7
2622 Female, age 67, right hemisphere 21.6
2692 Male, age 74, both hemispheres 20.7
2018 Male, age 76, both hemispheres 20.4
Perirhinal gyrus
nTPM: 29.4
1794 Male, age 80, right hemisphere 36.6
2521 Female, age 94, right hemisphere 35.3
1841 Female, age 85, right hemisphere 25.6
1847 Female, age 91, left hemisphere 25.6
2848 Male, age 76, right hemisphere 23.7
Subiculum
nTPM: 24.8
1977 Female, age 85, both hemispheres 30.2
2438 Female, age 94, left hemisphere 30.0
2619 Male, age 74, both hemispheres 26.2
2729 Female, age 91, right hemisphere 22.5
1901 Male, age 80, both hemispheres 22.3
2042 Male, age 76, both hemispheres 17.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 25.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.4
Samples: 255

Max nTPM: 57.3
Min nTPM: 1.2
Std nTPM: 9.2
Median nTPM: 24.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 57.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 53.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 52.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 47.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 47.3
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 45.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 45.2
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 44.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 44.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 43.9
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 43.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 18.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.6
FF:10169-103B7 60 years, female 18.6
FF:10153-102I9 76 years, female 18.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.7
Pig sample Sample description nTPM
Subiculum
nTPM: 25.8
Samples: 4

Max nTPM: 29.5
Min nTPM: 24.0
Sample A Female 29.5
Sample B Female 24.3
Sample C Male 25.2
Sample D Male 24.0
Dorsal hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 32.3
Min nTPM: 18.7
Sample A Female 32.3
Sample B Female 26.9
Sample C Male 21.1
Sample D Male 18.7
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 24.4
Min nTPM: 18.4
Sample A Female 20.9
Sample B Female 19.4
Sample C Male 24.4
Sample D Male 18.4
Ventral hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 32.7
Min nTPM: 18.4
Sample A Female 24.5
Sample B Female 18.4
Sample C Male 32.7
Sample D Male 26.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 20.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.9
Samples: 4

Max nTPM: 21.9
Min nTPM: 18.9
Sample A Male 18.9
Sample B Male 21.7
Sample C Female 21.9
Sample D Female 21.1
Hippocampal formation
nTPM: 16.8
Samples: 4

Max nTPM: 19.6
Min nTPM: 14.2
Sample A Male 19.6
Sample B Male 14.2
Sample C Female 16.3
Sample D Female 17.2

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