HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.1 nTPM
HPA Brain:63.8 nTPM
GTEx:10.1 nTPM
FANTOM5:166.0 Scaled Tags Per Million
Pig:86.5 nTPM
Mouse:127.9 nTPM
Allen mouse:1.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 63.8
Sample id Sample description nTPM
Hippocampus
nTPM: 43.7
1898 Male, age 80, left hemisphere 53.7
2148 Female, age 91, left hemisphere 51.5
1855 Male, age 76, left hemisphere 50.5
1911 Female, age 85, right hemisphere 48.4
2621 Female, age 67, right hemisphere 34.9
2529 Female, age 94, left hemisphere 23.3
Dentate gyrus
nTPM: 46.6
1927 Female, age 91, both hemispheres 77.5
2531 Female, age 67, both hemispheres 59.3
2246 Female, age 85, both hemispheres 47.5
2010 Male, age 76, both hemispheres 38.1
2528 Male, age 74, both hemispheres 34.2
2530 Female, age 94, left hemisphere 23.2
Entorhinal gyrus
nTPM: 31.3
1938 Female, age 85, left hemisphere 44.3
2764 Male, age 80, right hemisphere 37.1
1787 Male, age 76, left hemisphere 34.2
2613 Female, age 94, left hemisphere 29.6
2686 Male, age 75, right hemisphere 23.8
2117 Female, age 91, right hemisphere 18.9
Hippocampus, CA1
nTPM: 63.8
2749 Male, age 80, left hemisphere 113.0
2045 Male, age 76, both hemispheres 61.9
1873 Female, age 85, both hemispheres 59.5
2082 Female, age 91, right hemisphere 44.2
2527 Male, age 74, both hemispheres 40.2
Hippocampus, CA2
nTPM: 40.7
1892 Male, age 76, both hemispheres 50.6
1963 Male, age 80, left hemisphere 47.6
1940 Female, age 85, left hemisphere 47.3
2113 Female, age 91, right hemisphere 37.6
2249 Male, age 74, both hemispheres 34.8
2437 Female, age 94, left hemisphere 26.3
Hippocampus, CA3
nTPM: 61.4
2137 Male, age 80, left hemisphere 126.1
2620 Female, age 94, left hemisphere 82.0
1867 Male, age 76, both hemispheres 45.8
2861 Female, age 67, both hemispheres 42.5
1891 Female, age 85, both hemispheres 39.9
2436 Male, age 74, both hemispheres 32.0
Parahippocampal cortex
nTPM: 37.2
2245 Female, age 91, both hemispheres 52.4
1850 Male, age 80, both hemispheres 51.2
1933 Female, age 85, both hemispheres 45.0
2693 Female, age 94, both hemispheres 41.3
2250 Female, age 67, right hemisphere 38.5
1990 Female, age 91, right hemisphere 33.6
2532 Female, age 72, left hemisphere 31.6
2018 Male, age 76, both hemispheres 29.2
2622 Female, age 67, right hemisphere 29.2
2692 Male, age 74, both hemispheres 19.9
Perirhinal gyrus
nTPM: 54.3
1847 Female, age 91, left hemisphere 62.1
2521 Female, age 94, right hemisphere 59.7
1841 Female, age 85, right hemisphere 56.5
1794 Male, age 80, right hemisphere 55.7
2848 Male, age 76, right hemisphere 37.6
Subiculum
nTPM: 33.7
1901 Male, age 80, both hemispheres 55.7
1977 Female, age 85, both hemispheres 37.3
2729 Female, age 91, right hemisphere 35.9
2042 Male, age 76, both hemispheres 32.3
2438 Female, age 94, left hemisphere 22.0
2619 Male, age 74, both hemispheres 19.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 255

Max nTPM: 44.7
Min nTPM: 1.0
Std nTPM: 7.7
Median nTPM: 8.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 44.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 43.2
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 42.9
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 40.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 38.3
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 37.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 30.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 28.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 27.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 26.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 25.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 166.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 166.0
FF:10169-103B7 60 years, female 233.6
FF:10153-102I9 76 years, female 98.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 86.5
Pig sample Sample description nTPM
Subiculum
nTPM: 46.6
Samples: 4

Max nTPM: 58.7
Min nTPM: 41.2
Sample A Female 58.7
Sample B Female 41.2
Sample C Male 43.3
Sample D Male 43.0
Dorsal hippocampus
nTPM: 86.5
Samples: 4

Max nTPM: 97.7
Min nTPM: 57.2
Sample A Female 96.8
Sample B Female 97.7
Sample C Male 57.2
Sample D Male 94.3
Entorhinal cortex
nTPM: 65.9
Samples: 4

Max nTPM: 75.1
Min nTPM: 58.1
Sample A Female 75.1
Sample B Female 64.8
Sample C Male 58.1
Sample D Male 65.5
Ventral hippocampus
nTPM: 65.3
Samples: 4

Max nTPM: 101.1
Min nTPM: 47.8
Sample A Female 58.9
Sample B Female 53.2
Sample C Male 47.8
Sample D Male 101.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 127.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 112.6
Samples: 4

Max nTPM: 122.2
Min nTPM: 97.0
Sample A Male 113.3
Sample B Male 117.7
Sample C Female 97.0
Sample D Female 122.2
Hippocampal formation
nTPM: 127.9
Samples: 4

Max nTPM: 151.7
Min nTPM: 93.8
Sample A Male 116.1
Sample B Male 149.9
Sample C Female 151.7
Sample D Female 93.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
74431564 Antisense, RP_060207_02_B06, Mouse strain C57BL/6J (56 days, male) 1.3

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