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  • TISSUE

  • BRAIN

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  • SAP18
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:208.6 nTPM
HPA Brain:165.1 nTPM
GTEx:208.6 nTPM
Pig:39.7 nTPM
Mouse:18.1 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

165.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 130.7
2226 Male, age 75, left hemisphere 144.6
1961 Female, age 42, unknown 116.7
Dorsomedial nucleus
nTPM: 120.2
2041 Female, age 72, unknown 141.9
2017 Female, age 42, unknown 111.0
1989 Male, age 62, unknown 107.6
Lateral hypothalamic area
nTPM: 156.0
1791 Male, age 80, right hemisphere 168.0
2412 Male, age 62, unknown 161.8
2271 Male, age 75, both hemispheres 155.1
2228 Male, age 66, unknown 139.3
Mammillary body
nTPM: 149.9
1923 Female, age 72, unknown 171.0
2413 Male, age 66, unknown 153.1
1948 Female, age 72, unknown 148.0
1945 Male, age 80, right hemisphere 139.8
1834 Female, age 42, unknown 137.8
Paraventricular nucleus
nTPM: 123.2
2700 Male, age 62, unknown 123.2
Preoptic area
nTPM: 146.8
2414 Female, age 72, unknown 165.1
1907 Male, age 80, right hemisphere 141.7
1861 Female, age 42, unknown 133.6
Supraoptic nucleus
nTPM: 165.1
1894 Female, age 72, unknown 174.3
2043 Male, age 62, unknown 170.1
2835 Female, age 72, unknown 151.1
Ventromedial nucleus
nTPM: 127.0
1982 Female, age 72, unknown 133.4
1822 Female, age 42, unknown 120.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

208.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 208.6
Samples: 257

Max nTPM: 416.5
Min nTPM: 109.3
Std nTPM: 48.6
Median nTPM: 203.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 416.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 396.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 393.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 370.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 358.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 333.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 328.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 325.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 323.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 321.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 321.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 308.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 300.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 297.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 293.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 289.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 286.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 286.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 284.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 284.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 283.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 282.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 280.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 274.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 273.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 261.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 257.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 256.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 256.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 255.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 255.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 253.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 252.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 251.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 250.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 249.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 249.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 247.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 247.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 245.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 245.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 245.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 245.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 244.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 243.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 243.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 242.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 241.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 240.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 240.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 240.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 239.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 239.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 237.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 236.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 236.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 236.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 236.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 236.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 236.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 235.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 234.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 232.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 231.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 230.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 229.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 227.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 227.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 227.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 226.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 226.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 226.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 224.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 224.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 223.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 223.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 223.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 223.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 222.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 222.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 221.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 220.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 220.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 220.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 219.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 219.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 218.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 218.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 218.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 217.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 216.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 215.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 215.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 215.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 215.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 215.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 214.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 214.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 214.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 214.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 214.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 213.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 213.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 212.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 212.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 211.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 211.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 211.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 210.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 210.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 210.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 209.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 208.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 208.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 207.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 206.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 206.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 205.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 205.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 205.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 205.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 205.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 205.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 204.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 204.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 203.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 203.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 203.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 203.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 203.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 203.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 202.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 201.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 200.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 200.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 200.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 199.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 199.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 199.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 199.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 199.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 197.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 197.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 197.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 196.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 196.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 196.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 195.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 195.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 195.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 195.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 194.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 193.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 193.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 192.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 192.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 192.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 192.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 192.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 192.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 191.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 189.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 189.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 189.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 189.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 189.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 189.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 188.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 188.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 188.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 187.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 187.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 186.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 185.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 184.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 184.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 184.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 184.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 184.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 182.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 182.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 182.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 181.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 181.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 181.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 178.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 178.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 178.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 177.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 177.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 176.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 176.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 176.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 175.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 175.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 174.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 174.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 174.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 173.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 173.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 172.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 171.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 171.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 171.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 170.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 170.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 170.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 169.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 169.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 167.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 167.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 167.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 166.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 166.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 165.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 165.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 164.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 164.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 164.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 163.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 162.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 162.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 162.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 162.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 161.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 161.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 161.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 160.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 158.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 156.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 155.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 155.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 154.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 154.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 153.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 153.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 152.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 152.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 151.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 148.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 147.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 145.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 145.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 144.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 140.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 139.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 137.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 136.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 133.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 133.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 132.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 130.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 127.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 125.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 122.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 117.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 109.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 39.7
Samples: 4

Max nTPM: 48.6
Min nTPM: 34.2
Sample A Female 48.6
Sample B Female 37.6
Sample C Male 38.4
Sample D Male 34.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 18.1
Samples: 4

Max nTPM: 20.7
Min nTPM: 15.4
Sample A Male 18.1
Sample B Male 20.7
Sample C Female 18.2
Sample D Female 15.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
75990507 Antisense, RP_060608_01_C09, Mouse strain C57BL/6J (56 days, male) 0.2

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