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  • TISSUE

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  • ATP5MC3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:193.1 nTPM
HPA Brain:132.9 nTPM
GTEx:193.1 nTPM
Pig:16.2 nTPM
Mouse:717.8 nTPM
Allen mouse:10.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 82.8
2226 Male, age 75, left hemisphere 111.0
1961 Female, age 42, unknown 54.6
Dorsomedial nucleus
nTPM: 68.5
1989 Male, age 62, unknown 83.2
2041 Female, age 72, unknown 69.6
2017 Female, age 42, unknown 52.9
Lateral hypothalamic area
nTPM: 103.6
2228 Male, age 66, unknown 129.7
1791 Male, age 80, right hemisphere 115.4
2271 Male, age 75, both hemispheres 106.2
2412 Male, age 62, unknown 63.3
Mammillary body
nTPM: 132.9
1923 Female, age 72, unknown 269.6
2413 Male, age 66, unknown 122.4
1948 Female, age 72, unknown 96.9
1834 Female, age 42, unknown 94.2
1945 Male, age 80, right hemisphere 81.7
Paraventricular nucleus
nTPM: 49.3
2700 Male, age 62, unknown 49.3
Preoptic area
nTPM: 73.9
1907 Male, age 80, right hemisphere 97.4
1861 Female, age 42, unknown 72.4
2414 Female, age 72, unknown 51.8
Supraoptic nucleus
nTPM: 87.2
1894 Female, age 72, unknown 123.4
2835 Female, age 72, unknown 70.4
2043 Male, age 62, unknown 67.8
Ventromedial nucleus
nTPM: 66.5
1982 Female, age 72, unknown 72.2
1822 Female, age 42, unknown 60.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 193.1
Samples: 257

Max nTPM: 486.1
Min nTPM: 76.3
Std nTPM: 55.5
Median nTPM: 186.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 486.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 399.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 342.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 340.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 336.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 329.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 327.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 303.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 302.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 296.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 295.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 290.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 288.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 288.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 277.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 273.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 272.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 272.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 266.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 265.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 265.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 264.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 264.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 264.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 263.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 260.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 260.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 259.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 259.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 257.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 257.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 256.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 255.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 254.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 254.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 250.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 248.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 247.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 245.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 244.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 243.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 241.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 239.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 238.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 238.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 238.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 237.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 237.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 236.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 235.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 235.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 234.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 234.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 234.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 232.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 231.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 230.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 230.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 230.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 229.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 229.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 228.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 227.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 226.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 225.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 225.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 225.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 222.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 222.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 222.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 221.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 220.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 220.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 218.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 217.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 217.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 217.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 216.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 216.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 215.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 215.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 215.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 215.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 214.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 213.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 213.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 212.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 212.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 212.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 211.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 210.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 210.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 210.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 209.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 209.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 207.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 205.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 203.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 202.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 202.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 201.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 201.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 200.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 200.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 198.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 198.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 197.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 197.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 196.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 196.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 195.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 195.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 195.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 194.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 194.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 193.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 193.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 193.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 192.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 190.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 189.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 189.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 189.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 189.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 188.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 188.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 188.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 187.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 186.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 186.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 184.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 184.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 184.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 183.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 183.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 183.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 183.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 182.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 180.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 180.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 179.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 179.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 179.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 178.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 177.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 177.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 176.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 176.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 175.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 174.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 174.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 174.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 173.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 173.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 173.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 173.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 172.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 172.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 172.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 171.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 171.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 170.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 170.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 169.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 169.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 169.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 168.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 167.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 167.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 167.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 166.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 166.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 166.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 165.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 165.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 164.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 164.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 163.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 162.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 162.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 161.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 161.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 161.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 161.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 161.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 160.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 160.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 159.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 157.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 157.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 156.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 156.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 155.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 155.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 154.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 154.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 154.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 154.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 152.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 152.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 152.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 151.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 151.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 147.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 146.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 146.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 146.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 145.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 145.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 144.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 144.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 143.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 143.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 142.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 141.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 141.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 141.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 139.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 139.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 139.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 138.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 138.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 137.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 136.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 135.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 133.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 133.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 133.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 131.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 130.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 125.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 123.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 123.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 122.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 122.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 122.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 120.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 120.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 120.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 119.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 117.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 117.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 113.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 112.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 109.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 109.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 107.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 106.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 106.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 105.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 104.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 103.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 102.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 100.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 99.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 97.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 76.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 16.2
Samples: 4

Max nTPM: 18.2
Min nTPM: 14.6
Sample A Female 18.2
Sample B Female 16.3
Sample C Male 15.7
Sample D Male 14.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

717.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 717.8
Samples: 4

Max nTPM: 811.4
Min nTPM: 667.5
Sample A Male 685.0
Sample B Male 811.4
Sample C Female 707.4
Sample D Female 667.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.5
69526970 Antisense, RP_050421_02_A07, Mouse strain C57BL/6J (56 days, male) 10.5

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