HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:11.8 nTPM
HPA Brain:91.0 nTPM
GTEx:11.8 nTPM
FANTOM5:44.2 Scaled Tags Per Million
Pig:90.1 nTPM
Mouse:112.2 nTPM
Allen mouse:14.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047720Antibody HPA050538
Glial cells Not detectedNot detected
Neuronal cells HighNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 91.0
Sample id Sample description nTPM
Hippocampus
nTPM: 80.4
2621 Female, age 67, right hemisphere 98.1
1898 Male, age 80, left hemisphere 97.1
1855 Male, age 76, left hemisphere 85.5
2148 Female, age 91, left hemisphere 74.8
1911 Female, age 85, right hemisphere 73.6
2529 Female, age 94, left hemisphere 53.5
Dentate gyrus
nTPM: 82.4
2530 Female, age 94, left hemisphere 92.7
2531 Female, age 67, both hemispheres 89.5
1927 Female, age 91, both hemispheres 87.4
2246 Female, age 85, both hemispheres 86.5
2010 Male, age 76, both hemispheres 79.1
2528 Male, age 74, both hemispheres 59.0
Entorhinal gyrus
nTPM: 82.0
2613 Female, age 94, left hemisphere 110.7
2764 Male, age 80, right hemisphere 93.2
1938 Female, age 85, left hemisphere 92.2
1787 Male, age 76, left hemisphere 73.0
2686 Male, age 75, right hemisphere 72.5
2117 Female, age 91, right hemisphere 50.4
Hippocampus, CA1
nTPM: 91.0
2749 Male, age 80, left hemisphere 163.2
1873 Female, age 85, both hemispheres 96.8
2527 Male, age 74, both hemispheres 70.7
2045 Male, age 76, both hemispheres 65.6
2082 Female, age 91, right hemisphere 58.5
Hippocampus, CA2
nTPM: 73.0
1963 Male, age 80, left hemisphere 98.7
1892 Male, age 76, both hemispheres 86.3
2437 Female, age 94, left hemisphere 74.7
1940 Female, age 85, left hemisphere 70.5
2249 Male, age 74, both hemispheres 55.3
2113 Female, age 91, right hemisphere 52.3
Hippocampus, CA3
nTPM: 88.0
2137 Male, age 80, left hemisphere 136.7
2861 Female, age 67, both hemispheres 114.9
2620 Female, age 94, left hemisphere 87.3
1867 Male, age 76, both hemispheres 71.5
1891 Female, age 85, both hemispheres 65.2
2436 Male, age 74, both hemispheres 52.4
Parahippocampal cortex
nTPM: 80.0
2622 Female, age 67, right hemisphere 95.6
2532 Female, age 72, left hemisphere 93.0
2245 Female, age 91, both hemispheres 89.9
1850 Male, age 80, both hemispheres 88.4
1933 Female, age 85, both hemispheres 87.4
2693 Female, age 94, both hemispheres 76.5
2250 Female, age 67, right hemisphere 72.2
1990 Female, age 91, right hemisphere 68.0
2018 Male, age 76, both hemispheres 67.0
2692 Male, age 74, both hemispheres 61.6
Perirhinal gyrus
nTPM: 85.9
1794 Male, age 80, right hemisphere 101.7
1847 Female, age 91, left hemisphere 92.7
1841 Female, age 85, right hemisphere 90.8
2521 Female, age 94, right hemisphere 85.7
2848 Male, age 76, right hemisphere 58.8
Subiculum
nTPM: 71.9
1901 Male, age 80, both hemispheres 91.9
1977 Female, age 85, both hemispheres 83.4
2042 Male, age 76, both hemispheres 73.9
2438 Female, age 94, left hemisphere 67.9
2619 Male, age 74, both hemispheres 62.4
2729 Female, age 91, right hemisphere 51.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 255

Max nTPM: 46.3
Min nTPM: 3.6
Std nTPM: 5.0
Median nTPM: 11.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 46.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 30.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 26.2
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 24.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 23.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 22.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 22.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 21.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 44.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.2
FF:10169-103B7 60 years, female 47.7
FF:10153-102I9 76 years, female 40.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 90.1
Pig sample Sample description nTPM
Subiculum
nTPM: 66.8
Samples: 4

Max nTPM: 83.6
Min nTPM: 56.7
Sample A Female 83.6
Sample B Female 56.7
Sample C Male 66.9
Sample D Male 60.0
Dorsal hippocampus
nTPM: 90.1
Samples: 4

Max nTPM: 114.5
Min nTPM: 67.3
Sample A Female 114.5
Sample B Female 107.2
Sample C Male 67.3
Sample D Male 71.3
Entorhinal cortex
nTPM: 69.1
Samples: 4

Max nTPM: 80.2
Min nTPM: 53.0
Sample A Female 80.2
Sample B Female 53.0
Sample C Male 74.3
Sample D Male 69.0
Ventral hippocampus
nTPM: 77.5
Samples: 4

Max nTPM: 117.6
Min nTPM: 44.9
Sample A Female 66.2
Sample B Female 44.9
Sample C Male 81.2
Sample D Male 117.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 112.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.6
Samples: 4

Max nTPM: 112.8
Min nTPM: 71.6
Sample A Male 73.2
Sample B Male 71.6
Sample C Female 72.7
Sample D Female 112.8
Hippocampal formation
nTPM: 112.2
Samples: 4

Max nTPM: 147.1
Min nTPM: 75.5
Sample A Male 75.5
Sample B Male 129.8
Sample C Female 147.1
Sample D Female 96.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.1
75934527 Antisense, RP_060530_01_E03, Mouse strain C57BL/6J (56 days, male) 19.1
68444994 Antisense, RP_050111_02_E10, Mouse strain C57BL/6J (56 days, male) 9.0

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