HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.8 nTPM
HPA Brain:64.5 nTPM
GTEx:14.8 nTPM
FANTOM5:91.1 Scaled Tags Per Million
Pig:53.2 nTPM
Mouse:18.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058905
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 64.5
Sample id Sample description nTPM
Hippocampus
nTPM: 53.4
2621 Female, age 67, right hemisphere 66.4
2148 Female, age 91, left hemisphere 53.4
2529 Female, age 94, left hemisphere 52.4
1898 Male, age 80, left hemisphere 52.0
1911 Female, age 85, right hemisphere 50.1
1855 Male, age 76, left hemisphere 46.3
Dentate gyrus
nTPM: 60.4
2531 Female, age 67, both hemispheres 72.0
2530 Female, age 94, left hemisphere 69.0
2010 Male, age 76, both hemispheres 59.0
1927 Female, age 91, both hemispheres 55.4
2528 Male, age 74, both hemispheres 53.6
2246 Female, age 85, both hemispheres 53.4
Entorhinal gyrus
nTPM: 60.0
2764 Male, age 80, right hemisphere 69.0
2117 Female, age 91, right hemisphere 66.9
2613 Female, age 94, left hemisphere 66.5
2686 Male, age 75, right hemisphere 58.1
1938 Female, age 85, left hemisphere 50.3
1787 Male, age 76, left hemisphere 49.0
Hippocampus, CA1
nTPM: 57.9
2749 Male, age 80, left hemisphere 82.4
1873 Female, age 85, both hemispheres 58.6
2527 Male, age 74, both hemispheres 54.9
2045 Male, age 76, both hemispheres 49.5
2082 Female, age 91, right hemisphere 43.9
Hippocampus, CA2
nTPM: 56.8
1963 Male, age 80, left hemisphere 76.8
2249 Male, age 74, both hemispheres 59.9
2437 Female, age 94, left hemisphere 59.2
1892 Male, age 76, both hemispheres 55.5
1940 Female, age 85, left hemisphere 45.7
2113 Female, age 91, right hemisphere 43.9
Hippocampus, CA3
nTPM: 53.5
1891 Female, age 85, both hemispheres 61.4
2620 Female, age 94, left hemisphere 59.3
2861 Female, age 67, both hemispheres 58.7
1867 Male, age 76, both hemispheres 57.1
2137 Male, age 80, left hemisphere 45.6
2436 Male, age 74, both hemispheres 39.0
Parahippocampal cortex
nTPM: 57.1
1990 Female, age 91, right hemisphere 68.7
2532 Female, age 72, left hemisphere 64.7
1850 Male, age 80, both hemispheres 63.0
2692 Male, age 74, both hemispheres 61.3
2018 Male, age 76, both hemispheres 56.9
1933 Female, age 85, both hemispheres 55.7
2245 Female, age 91, both hemispheres 54.6
2693 Female, age 94, both hemispheres 53.9
2622 Female, age 67, right hemisphere 46.7
2250 Female, age 67, right hemisphere 45.3
Perirhinal gyrus
nTPM: 53.4
1847 Female, age 91, left hemisphere 56.8
2521 Female, age 94, right hemisphere 55.7
1794 Male, age 80, right hemisphere 55.2
1841 Female, age 85, right hemisphere 54.9
2848 Male, age 76, right hemisphere 44.3
Subiculum
nTPM: 64.5
2438 Female, age 94, left hemisphere 76.7
1977 Female, age 85, both hemispheres 69.0
2042 Male, age 76, both hemispheres 68.3
1901 Male, age 80, both hemispheres 66.8
2619 Male, age 74, both hemispheres 61.3
2729 Female, age 91, right hemisphere 44.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.8
Samples: 255

Max nTPM: 36.1
Min nTPM: 7.9
Std nTPM: 4.9
Median nTPM: 13.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 36.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 35.3
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 34.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 33.7
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 31.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 30.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 29.4
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 29.1
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 29.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 28.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 28.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 91.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 91.1
FF:10169-103B7 60 years, female 97.6
FF:10153-102I9 76 years, female 84.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 53.2
Pig sample Sample description nTPM
Subiculum
nTPM: 39.6
Samples: 4

Max nTPM: 44.3
Min nTPM: 32.6
Sample A Female 44.3
Sample B Female 32.6
Sample C Male 43.9
Sample D Male 37.4
Dorsal hippocampus
nTPM: 52.3
Samples: 4

Max nTPM: 66.5
Min nTPM: 42.6
Sample A Female 66.5
Sample B Female 48.5
Sample C Male 51.6
Sample D Male 42.6
Entorhinal cortex
nTPM: 47.5
Samples: 4

Max nTPM: 48.6
Min nTPM: 45.9
Sample A Female 48.6
Sample B Female 47.0
Sample C Male 48.3
Sample D Male 45.9
Ventral hippocampus
nTPM: 53.2
Samples: 4

Max nTPM: 62.4
Min nTPM: 38.6
Sample A Female 59.1
Sample B Female 38.6
Sample C Male 62.4
Sample D Male 52.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.9
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.9
Sample A Male 15.6
Sample B Male 13.9
Sample C Female 16.9
Sample D Female 17.1
Hippocampal formation
nTPM: 18.1
Samples: 4

Max nTPM: 21.9
Min nTPM: 13.2
Sample A Male 13.2
Sample B Male 20.1
Sample C Female 21.9
Sample D Female 17.2

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