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  • ATP5MC1
TISSUE KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Kidney
Tissue proteome
Kidney
Tissue methods
KIDNEY - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:277.3 nTPM
HPA:248.7 nTPM
GTEx:277.3 nTPM
FANTOM5:69.0 Scaled Tags Per Million
KIDNEY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

KIDNEY - Annotated protein expression
Pending normal tissue analysis

KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

248.7
overview
Female, age 58
Kidney sample 55
nTPM: 222.9
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 184.3
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 154.9
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 214.4
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 243
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 275.9
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 562.1
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 200.2
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 180.6
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

277.3
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 244.1
Samples: 104

Max nTPM: 596.7
Min nTPM: 74.5
Std nTPM: 94.1
Median nTPM: 228.6
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 596.7
GTEX-QDVN-1726-SM-HL9TO 50-59 years, male 513.9
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 464.1
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 456.2
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 444.5
GTEX-O5YV-1226-SM-EV795 60-69 years, female 440.4
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 422.3
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 417.5
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 386.6
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 356.9
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 351.5
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 345.5
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 344.8
GTEX-14PJ2-1826-SM-HL9UB 50-59 years, male 337.6
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 326.4
GTEX-1O9I2-1926-SM-F2TBQ 50-59 years, male 320.5
GTEX-WL46-1926-SM-GNIN6 50-59 years, male 312.1
GTEX-15DCD-1926-SM-HAV33 70-79 years, female 311.2
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 311.1
GTEX-14C39-2126-SM-664OH 40-49 years, male 310.1
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 307.3
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 304.7
GTEX-13FHP-2126-SM-GIN8J 50-59 years, male 302.5
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 301.8
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 301.7
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 300.3
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 299.5
GTEX-1HCVE-2126-SM-HL9UO 50-59 years, male 293.3
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 291.9
GTEX-1QAET-2126-SM-F2TBS 50-59 years, male 289.8
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 285.3
GTEX-1117F-2126-SM-GIN9G 60-69 years, female 284.0
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 283.0
GTEX-1ICLY-2026-SM-GA913 50-59 years, male 279.6
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 269.5
GTEX-1RQEC-2426-SM-F2I1J 60-69 years, male 266.8
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 263.4
GTEX-1JJE9-1026-SM-HL9TH 70-79 years, male 258.3
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 256.4
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 256.0
GTEX-12696-0926-SM-5FQTV 60-69 years, male 251.7
GTEX-14JG1-2326-SM-HAUZ5 40-49 years, male 249.9
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 249.5
GTEX-NFK9-1826-SM-HL9T3 40-49 years, male 246.6
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 240.1
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 239.3
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 239.0
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 238.7
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 236.6
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 234.2
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 230.9
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 229.5
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 227.6
GTEX-13O3O-1726-SM-GJ3RL 60-69 years, female 227.5
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 225.3
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 224.5
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 223.2
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 221.2
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 217.1
GTEX-16Z82-2826-SM-HAUZZ 60-69 years, male 217.1
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 216.8
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 215.1
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 212.1
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 211.3
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 207.0
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 206.1
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 205.9
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 205.6
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 203.9
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 202.3
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 200.8
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 194.7
GTEX-13112-2126-SM-5GCO4 50-59 years, male 193.6
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 193.2
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 191.6
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 185.0
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 181.8
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 180.9
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 176.9
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 172.8
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 172.2
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 171.5
GTEX-16XZZ-2226-SM-HAV34 60-69 years, male 168.2
GTEX-ZXG5-2026-SM-HAUZV 60-69 years, male 166.7
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 165.2
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 162.3
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 162.1
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 160.1
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 159.6
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 157.0
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 156.3
GTEX-W5X1-1626-SM-H7OGO 40-49 years, female 153.5
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 140.9
GTEX-16XZY-1026-SM-HAV39 70-79 years, male 136.6
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 133.4
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 132.3
GTEX-1LH75-1326-SM-F2I1R 50-59 years, female 125.2
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 117.6
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 117.3
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 106.8
GTEX-RN64-1626-SM-48FD7 50-59 years, male 91.3
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 82.3
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 79.5
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 74.5
Show allShow less
Kidney - Medulla
Average nTPM: 277.3
Samples: 11

Max nTPM: 652.9
Min nTPM: 189.3
Std nTPM: 134.8
Median nTPM: 228.9
GTEX-N7MS-1526-SM-HAUZP 60-69 years, male 652.9
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 420.7
GTEX-P4QS-1226-SM-HPAG8 60-69 years, male 292.1
GTEX-S33H-1526-SM-GQ1CB 30-39 years, male 230.8
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 230.5
GTEX-QEG4-1526-SM-GPRWK 30-39 years, male 228.9
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 220.1
GTEX-SIU8-1926-SM-H7OG4 50-59 years, male 200.4
GTEX-T6MN-1926-SM-GOQYD 50-59 years, male 192.4
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 192.2
GTEX-QEG5-2026-SM-H6Q6I 20-29 years, male 189.3
Show allShow less

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

69.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 69.0
FF:10017-101C8 60,62,63 years, female 69.0

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