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  • TISSUE

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  • CBR1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:110.5 nTPM
HPA Brain:161.8 nTPM
GTEx:110.5 nTPM
Pig:1.3 nTPM
Mouse:60.5 nTPM
Allen mouse:4.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 55.1
2226 Male, age 75, left hemisphere 70.0
1961 Female, age 42, unknown 40.2
Dorsomedial nucleus
nTPM: 83.0
1989 Male, age 62, unknown 97.0
2017 Female, age 42, unknown 91.8
2041 Female, age 72, unknown 60.2
Lateral hypothalamic area
nTPM: 105.4
2271 Male, age 75, both hemispheres 136.5
2228 Male, age 66, unknown 109.8
1791 Male, age 80, right hemisphere 103.3
2412 Male, age 62, unknown 72.1
Mammillary body
nTPM: 161.8
1945 Male, age 80, right hemisphere 191.6
1834 Female, age 42, unknown 167.9
1948 Female, age 72, unknown 156.4
1923 Female, age 72, unknown 154.3
2413 Male, age 66, unknown 138.7
Paraventricular nucleus
nTPM: 119.0
2700 Male, age 62, unknown 119.0
Preoptic area
nTPM: 104.6
2414 Female, age 72, unknown 147.7
1861 Female, age 42, unknown 106.3
1907 Male, age 80, right hemisphere 59.8
Supraoptic nucleus
nTPM: 134.4
1894 Female, age 72, unknown 159.2
2043 Male, age 62, unknown 153.5
2835 Female, age 72, unknown 90.4
Ventromedial nucleus
nTPM: 50.4
1982 Female, age 72, unknown 59.5
1822 Female, age 42, unknown 41.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 110.5
Samples: 257

Max nTPM: 334.6
Min nTPM: 31.6
Std nTPM: 51.3
Median nTPM: 96.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 334.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 289.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 289.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 280.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 274.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 258.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 251.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 248.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 245.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 244.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 241.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 231.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 225.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 225.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 223.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 219.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 216.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 211.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 206.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 200.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 199.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 199.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 197.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 189.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 184.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 181.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 172.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 168.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 168.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 168.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 164.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 164.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 164.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 159.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 158.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 157.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 156.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 155.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 154.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 153.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 151.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 150.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 148.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 147.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 147.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 147.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 145.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 144.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 143.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 140.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 140.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 140.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 138.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 138.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 138.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 138.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 137.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 137.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 134.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 132.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 131.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 131.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 129.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 128.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 128.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 127.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 127.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 127.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 126.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 125.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 124.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 123.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 122.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 118.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 117.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 117.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 117.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 117.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 116.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 115.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 115.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 114.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 114.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 114.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 113.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 113.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 112.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 112.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 112.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 111.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 111.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 111.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 111.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 110.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 110.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 110.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 110.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 109.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 109.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 108.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 107.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 107.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 107.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 106.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 106.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 105.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 105.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 105.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 104.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 104.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 104.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 104.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 103.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 103.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 101.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 101.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 100.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 100.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 99.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 99.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 97.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 97.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 97.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 96.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 96.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 96.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 96.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 96.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 96.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 96.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 95.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 94.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 93.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 91.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 91.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 91.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 91.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 91.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 90.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 90.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 90.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 89.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 89.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 89.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 89.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 88.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 88.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 88.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 88.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 87.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 87.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 87.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 87.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 86.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 85.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 85.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 85.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 85.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 85.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 84.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 84.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 84.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 84.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 84.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 84.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 83.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 83.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 83.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 83.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 82.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 82.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 81.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 81.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 81.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 81.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 81.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 81.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 81.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 80.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 80.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 80.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 79.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 79.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 79.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 79.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 79.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 77.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 77.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 77.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 76.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 76.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 76.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 76.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 75.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 75.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 75.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 74.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 74.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 74.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 74.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 74.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 73.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 73.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 73.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 72.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 72.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 71.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 71.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 71.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 70.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 70.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 70.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 70.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 70.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 69.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 69.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 68.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 68.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 68.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 68.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 67.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 67.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 67.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 67.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 66.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 66.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 65.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 65.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 64.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 64.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 64.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 64.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 64.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 63.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 63.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 62.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 62.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 61.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 61.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 61.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 61.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 60.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 60.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 59.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 57.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 57.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 57.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 55.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 53.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 52.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 51.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 50.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 48.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 45.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 44.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 42.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 31.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 31.0
Samples: 4

Max nTPM: 38.6
Min nTPM: 24.1
Sample A Female 38.6
Sample B Female 29.4
Sample C Male 31.7
Sample D Male 24.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 60.5
Samples: 4

Max nTPM: 67.3
Min nTPM: 51.3
Sample A Male 67.3
Sample B Male 67.0
Sample C Female 56.3
Sample D Female 51.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.2
68301431 Antisense, RP_041130_01_C04, Mouse strain C57BL/6J (56 days, male) 4.2
Hypothalamus
Expression energy: 4.2
68301431 Antisense, RP_041130_01_C04, Mouse strain C57BL/6J (56 days, male) 4.2

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