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ZNF385A
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  • ZNF385A
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:51.2 nTPM
HPA Brain:164.4 nTPM
GTEx:51.2 nTPM
FANTOM5:57.7 Scaled Tags Per Million
Pig:60.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

164.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 136.4
2565 Male, age 75, midline 170.8
2194 Female, age 79, both hemispheres 144.6
2048 Male, age 55, midline 123.2
1981 Female, age 72, midline 122.5
2816 Male, age 47, midline 120.7
Cervical spinal cord, dorsal horn
nTPM: 119.9
2721 Male, age 90, both hemispheres 198.2
2297 Male, age 75, both hemispheres 133.4
1877 Male, age 55, unknown 114.6
2173 Female, age 72, unknown 106.5
2069 Male, age 47, both hemispheres 95.5
2296 Male, age 66, both hemispheres 71.0
Cervical spinal cord, ventral horn
nTPM: 164.4
2295 Male, age 66, both hemispheres 218.7
2809 Male, age 90, both hemispheres 198.0
2480 Male, age 75, both hemispheres 185.3
2820 Female, age 79, both hemispheres 141.4
2098 Female, age 72, unknown 125.8
2068 Male, age 55, unknown 117.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 51.2
Samples: 204

Max nTPM: 129.4
Min nTPM: 15.4
Std nTPM: 20.6
Median nTPM: 47.9
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 129.4
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 118.9
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 111.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 108.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 105.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 104.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 98.9
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 96.2
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 95.3
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 92.8
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 89.1
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 88.7
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 87.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 87.3
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 86.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 85.1
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 84.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 82.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 81.6
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 81.4
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 79.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 78.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 76.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 76.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 75.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 74.7
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 73.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 72.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 72.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 72.0
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 71.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 71.4
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 70.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 70.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 69.9
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 69.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 69.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 69.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 69.1
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 68.8
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 67.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 65.4
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 65.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 65.1
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 64.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 64.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 64.1
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 63.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 63.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 63.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 62.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 61.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 61.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 60.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 60.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 60.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 60.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 60.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 59.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 59.0
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 58.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 57.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 57.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 56.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 56.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 56.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 56.5
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 56.5
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 56.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 56.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 55.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 55.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 54.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 53.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 53.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 53.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 53.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 53.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 52.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 52.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 51.8
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 51.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 51.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 51.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 51.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 51.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 50.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 50.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 50.2
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 49.9
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 49.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 49.8
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 49.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 49.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 49.0
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 48.6
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 48.5
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 48.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 48.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 48.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 47.9
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 47.9
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 47.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 47.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 47.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 47.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 47.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 47.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 47.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 46.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 46.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 46.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 46.6
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 46.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 45.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 45.1
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 44.9
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 44.8
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 44.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 44.3
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 44.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 44.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 43.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 43.7
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 42.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 42.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 42.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 41.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 41.5
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 41.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 41.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 40.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 39.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 39.7
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 39.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 39.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 39.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 38.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 38.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 38.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 38.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 38.2
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 38.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 38.1
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 37.7
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 37.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 37.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 37.5
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 37.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 37.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 37.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 36.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 36.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 36.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 36.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 35.7
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 35.6
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 35.2
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 35.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 35.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 35.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 34.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 34.6
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 34.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 33.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 33.7
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 33.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 33.2
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 33.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 32.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 32.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 32.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 31.7
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 31.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 30.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 30.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 30.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 30.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 29.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 29.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 29.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 28.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 28.7
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 28.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 28.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 27.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 27.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 27.5
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 27.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 27.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 27.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 26.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 26.3
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 25.9
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 25.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 25.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 24.2
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 23.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 20.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 20.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 17.3
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 16.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 15.7
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 15.4
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

57.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 57.7
FF:10159-103A6 76 years, female 65.6
FF:10181-103D1 60 years, female 49.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.1
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 52.3
Samples: 4

Max nTPM: 63.7
Min nTPM: 45.3
Sample A Female 50.2
Sample B Female 45.3
Sample C Male 50.1
Sample D Male 63.7
Ventral spinal cord
nTPM: 60.1
Samples: 4

Max nTPM: 75.0
Min nTPM: 50.9
Sample A Female 59.5
Sample B Female 50.9
Sample C Male 75.0
Sample D Male 55.1

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