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RPL26
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL26
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:1019.1 nTPM
FANTOM5:82.8 Scaled Tags Per Million
Pig:204.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA030449Antibody CAB037301
Glial cells Not detectedMedium
Neuronal cells MediumHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1019.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1019.1
Samples: 300

Max nTPM: 3720.0
Min nTPM: 538.9
Std nTPM: 330.2
Median nTPM: 959.6
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 3720.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2577.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2384.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2189.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2085.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1961.5
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 1928.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1927.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1694.3
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 1671.2
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 1663.8
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 1661.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1641.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1633.2
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 1626.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1616.7
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 1605.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1604.6
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 1599.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1552.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1548.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1494.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1473.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1409.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1395.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1374.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1369.3
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 1369.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1366.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1352.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1344.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1309.3
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 1303.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1301.5
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 1297.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1296.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1287.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1273.7
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 1267.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1259.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1236.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1235.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1227.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1217.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1217.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1214.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1214.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1211.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1205.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1204.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1203.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1202.8
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 1201.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1198.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1187.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1184.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1184.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1183.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1180.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1177.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1175.6
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 1168.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1166.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1162.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1158.9
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 1154.1
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 1153.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1143.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1133.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1131.6
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 1131.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1130.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1129.4
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 1128.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1124.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1123.2
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 1122.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1121.4
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 1116.9
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 1115.5
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 1115.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1113.8
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 1111.5
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 1109.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1104.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1104.5
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 1100.6
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 1084.0
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 1081.2
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 1079.6
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 1076.5
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 1074.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1073.7
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 1070.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1066.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1065.7
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 1061.2
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 1056.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1056.0
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 1054.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1045.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1043.7
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 1041.8
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 1040.7
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 1036.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1036.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1035.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1035.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1034.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1033.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1029.8
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 1028.8
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 1028.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1027.8
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 1026.4
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 1023.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1022.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1021.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1018.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1017.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1016.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1014.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1014.0
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 1013.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1013.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1012.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1011.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1011.0
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 1005.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1005.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1000.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 990.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 988.7
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 984.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 983.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 983.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 983.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 979.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 979.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 977.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 973.9
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 971.8
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 969.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 967.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 966.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 964.5
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 962.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 962.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 961.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 961.4
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 957.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 957.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 957.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 955.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 953.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 953.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 951.7
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 950.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 949.8
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 948.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 948.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 948.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 946.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 941.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 941.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 936.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 932.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 928.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 928.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 927.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 926.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 923.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 923.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 923.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 921.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 921.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 920.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 919.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 917.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 913.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 908.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 906.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 897.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 896.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 894.2
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 894.0
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 892.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 888.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 885.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 883.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 877.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 874.6
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 874.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 872.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 872.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 868.3
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 867.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 867.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 867.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 866.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 865.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 864.7
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 864.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 857.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 857.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 856.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 856.8
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 855.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 853.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 852.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 852.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 850.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 849.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 847.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 846.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 845.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 842.9
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 841.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 832.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 831.5
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 830.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 825.2
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 823.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 822.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 822.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 822.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 817.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 808.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 808.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 807.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 807.1
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 807.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 804.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 803.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 801.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 799.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 797.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 796.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 795.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 794.8
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 790.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 790.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 786.0
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 782.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 777.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 777.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 775.8
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 772.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 772.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 771.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 771.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 769.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 769.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 767.1
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 765.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 764.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 762.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 762.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 760.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 753.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 752.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 747.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 746.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 745.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 739.9
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 727.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 727.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 723.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 721.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 721.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 720.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 718.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 716.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 715.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 709.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 708.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 706.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 704.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 700.4
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 695.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 694.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 689.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 677.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 673.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 667.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 659.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 659.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 652.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 651.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 647.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 630.3
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 625.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 622.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 622.3
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 621.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 578.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 568.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 565.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 550.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 538.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

82.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 82.8
FF:10164-103B2 76 years, female 82.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

204.5
Pig sample Sample description nTPM
Caudate
nTPM: 204.5
Samples: 4

Max nTPM: 223.9
Min nTPM: 174.7
Sample A Female 209.4
Sample B Female 223.9
Sample C Male 210.1
Sample D Male 174.7

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