We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL39L
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RPL39L
BRAIN HIPPOCAMPAL FORMATION Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hippocampal formation
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:9.6 nTPM
HPA Brain:27.5 nTPM
GTEx:9.6 nTPM
FANTOM5:6.5 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047105
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.5
Sample id Sample description nTPM
Hippocampus
nTPM: 25.7
1855 Male, age 76, left hemisphere 29.8
2529 Female, age 94, left hemisphere 28.1
1911 Female, age 85, right hemisphere 26.8
2148 Female, age 91, left hemisphere 26.8
2621 Female, age 67, right hemisphere 23.2
1898 Male, age 80, left hemisphere 19.7
Dentate gyrus
nTPM: 27.4
2010 Male, age 76, both hemispheres 31.2
2246 Female, age 85, both hemispheres 29.8
2531 Female, age 67, both hemispheres 29.5
2530 Female, age 94, left hemisphere 27.2
2528 Male, age 74, both hemispheres 23.8
1927 Female, age 91, both hemispheres 22.6
Entorhinal gyrus
nTPM: 24.2
2613 Female, age 94, left hemisphere 25.7
2764 Male, age 80, right hemisphere 25.6
1938 Female, age 85, left hemisphere 25.2
2686 Male, age 75, right hemisphere 24.2
1787 Male, age 76, left hemisphere 23.6
2117 Female, age 91, right hemisphere 21.0
Hippocampus, CA1
nTPM: 26.4
2045 Male, age 76, both hemispheres 34.4
1873 Female, age 85, both hemispheres 29.1
2082 Female, age 91, right hemisphere 23.9
2749 Male, age 80, left hemisphere 22.6
2527 Male, age 74, both hemispheres 21.9
Hippocampus, CA2
nTPM: 24.0
2113 Female, age 91, right hemisphere 27.5
1892 Male, age 76, both hemispheres 26.4
1940 Female, age 85, left hemisphere 25.5
2437 Female, age 94, left hemisphere 24.6
2249 Male, age 74, both hemispheres 21.0
1963 Male, age 80, left hemisphere 19.3
Hippocampus, CA3
nTPM: 27.5
2620 Female, age 94, left hemisphere 34.2
1891 Female, age 85, both hemispheres 28.9
2861 Female, age 67, both hemispheres 27.4
2137 Male, age 80, left hemisphere 27.2
1867 Male, age 76, both hemispheres 24.3
2436 Male, age 74, both hemispheres 22.8
Parahippocampal cortex
nTPM: 25.4
2532 Female, age 72, left hemisphere 29.4
1850 Male, age 80, both hemispheres 28.5
2622 Female, age 67, right hemisphere 26.7
2692 Male, age 74, both hemispheres 26.1
2018 Male, age 76, both hemispheres 25.4
2245 Female, age 91, both hemispheres 25.2
2693 Female, age 94, both hemispheres 24.4
1933 Female, age 85, both hemispheres 23.4
2250 Female, age 67, right hemisphere 23.3
1990 Female, age 91, right hemisphere 21.6
Perirhinal gyrus
nTPM: 23.7
2848 Male, age 76, right hemisphere 28.5
1841 Female, age 85, right hemisphere 24.0
1794 Male, age 80, right hemisphere 23.7
2521 Female, age 94, right hemisphere 22.4
1847 Female, age 91, left hemisphere 19.9
Subiculum
nTPM: 27.0
2438 Female, age 94, left hemisphere 32.9
2042 Male, age 76, both hemispheres 29.6
1901 Male, age 80, both hemispheres 27.1
1977 Female, age 85, both hemispheres 25.5
2619 Male, age 74, both hemispheres 24.2
2729 Female, age 91, right hemisphere 22.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.6
Samples: 197

Max nTPM: 27.4
Min nTPM: 4.5
Std nTPM: 3.5
Median nTPM: 9.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 27.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 22.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 22.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 22.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 20.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 20.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 19.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 18.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 18.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 17.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 16.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 16.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 14.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 14.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 14.2
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 14.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 14.0
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 13.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 13.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 13.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 13.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 13.1
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 12.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 12.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 12.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 12.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 12.5
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 12.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 12.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 12.2
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 12.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 12.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 12.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 12.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 11.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 11.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 11.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 11.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 11.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 11.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 11.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 11.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 11.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 11.1
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 11.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 11.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 11.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 11.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 11.0
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 11.0
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 10.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 10.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 10.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 10.8
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 10.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 10.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 10.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 10.6
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 10.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 10.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 10.4
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 10.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 10.3
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 10.2
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 10.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 10.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 10.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 10.1
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 10.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 10.0
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 10.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 10.0
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 10.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 10.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 9.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 9.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 9.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 9.9
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 9.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 9.8
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 9.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 9.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 9.7
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 9.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 9.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 9.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 9.6
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 9.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 9.4
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 9.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 9.3
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 9.3
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 9.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 9.1
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 9.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 9.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 9.0
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 9.0
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 9.0
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 8.9
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 8.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 8.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 8.8
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 8.6
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 8.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 8.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 8.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 8.5
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 8.5
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 8.4
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 8.3
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 8.3
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 8.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 8.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 8.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 8.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 8.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 8.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 8.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 8.1
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 8.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 8.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 8.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 8.0
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 8.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 7.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 7.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 7.8
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 7.8
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 7.8
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 7.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 7.7
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 7.7
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 7.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 7.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 7.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 7.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 7.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 7.5
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 7.4
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 7.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 7.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 7.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 7.3
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 7.3
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 7.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 7.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 7.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 7.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 7.2
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 7.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 7.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 7.1
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 7.1
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 7.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 7.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 7.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 7.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 6.9
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 6.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 6.9
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 6.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 6.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 6.7
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 6.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 6.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 6.7
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 6.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 6.6
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 6.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 6.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 6.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 6.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 6.4
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 6.3
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 6.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 6.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 6.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 6.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 6.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 6.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 6.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 6.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 6.0
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 6.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 5.9
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 5.8
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 5.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 5.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 5.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 5.4
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 5.3
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 5.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 5.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 5.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 4.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 4.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

6.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.5
FF:10153-102I9 76 years, female 7.8
FF:10169-103B7 60 years, female 5.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org