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TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
Tissue methods
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

151.935
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:145.4 nTPM
GTEx:86.0 nTPM
FANTOM5:286.4 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA007656Antibody CAB034931
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB034931
Hippocampal formation mean intensity 151.935
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Polymorph layer of the dentate gyrus 25.438
Molecular layer of the dentate gyrus 99.154
Granular dentate gyrus 24.475
CA1 - oriens layer 142.002
CA1 - pyramidal layer 44.622
CA1 - radiatum layer 139.721
CA2 - oriens layer 148.242
CA2 - pyramidal layer 73.776
CA2 - radiatum layer 132.040
CA3 - oriens layer 151.935
CA3 - pyramidal layer 36.231
CA3 - radiatum layer 150.832
Stratum lucidum 49.694
Lacunosum moleculare 115.463
Subiculum 128.411

HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.4
Sample id Sample description nTPM
Hippocampus
nTPM: 145.4
1898 Male, age 80, left hemisphere 191.6
2621 Female, age 67, right hemisphere 178.4
2148 Female, age 91, left hemisphere 154.8
1911 Female, age 85, right hemisphere 129.5
1855 Male, age 76, left hemisphere 116.5
2529 Female, age 94, left hemisphere 101.1

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.0
Samples: 255

Max nTPM: 253.2
Min nTPM: 1.0
Std nTPM: 53.3
Median nTPM: 81.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 253.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 228.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 216.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 210.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 204.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 200.0
GTEX-1F52S-0011-R1a-SM-9OSX9 60-69 years, female 198.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 195.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 193.9
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 190.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 190.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 182.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 179.4
GTEX-1KD4Q-0011-R1a-SM-F3K4Z 40-49 years, male 177.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 176.9
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 175.8
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 173.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 171.9
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 166.7
GTEX-15SHU-0011-R1b-SM-H6Q7U 40-49 years, female 166.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 165.2
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 164.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 163.2
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 158.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 157.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 153.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 153.7
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 153.2
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 152.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 150.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 149.7
GTEX-11H98-0011-R1a-SM-GIN8O 50-59 years, male 149.6
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 149.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 147.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 146.7
GTEX-11NV4-0011-R1a-SM-GINAK 60-69 years, male 144.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 144.1
GTEX-RU72-0011-R1A-SM-HAUZG 50-59 years, female 143.8
GTEX-1JMPZ-0011-R1b-SM-F6497 30-39 years, male 143.4
GTEX-1RQEC-0011-R1b-SM-F2I2E 60-69 years, male 142.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 141.6
GTEX-1JMQJ-0011-R1b-SM-F2T9P 50-59 years, male 140.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 139.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 138.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 138.3
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 137.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 136.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 133.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 133.3
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 133.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 131.6
GTEX-1JMOU-0011-R1b-SM-F341B 60-69 years, female 131.2
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 130.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 130.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 130.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 129.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 129.7
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 129.1
GTEX-11DYG-0011-R1a-SM-GI4X6 60-69 years, male 128.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 127.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 125.5
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 125.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 125.0
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 124.6
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 124.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 123.3
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 123.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 122.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 121.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 120.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 119.7
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 118.8
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 118.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 118.4
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 117.4
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 117.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 115.3
GTEX-11PRG-0011-R1b-SM-H7OHD 50-59 years, male 115.0
GTEX-15RJE-0011-R1b-SM-H6Q7N 40-49 years, male 114.9
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 113.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 113.8
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 113.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 112.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 111.0
GTEX-1MA7X-0011-R1b-SM-F2TAB 60-69 years, male 110.0
GTEX-12WSA-0011-R1b-SM-GI4VI 60-69 years, male 109.7
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 109.6
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 109.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 109.2
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 109.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 106.5
GTEX-1N2EE-0011-R1a-SM-F3K5K 60-69 years, male 106.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 106.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 105.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 105.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 103.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 103.5
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 103.1
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 102.9
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 100.8
GTEX-1POEN-0011-R1b-SM-F3K3K 30-39 years, female 100.6
GTEX-1RDX4-0011-R1a-SM-F3K5H 50-59 years, female 100.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 99.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 99.9
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 99.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 96.1
GTEX-1RQED-0011-R1a-SM-F3K5W 60-69 years, male 94.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 93.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 93.0
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 92.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 92.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 92.1
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 91.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 91.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 90.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 89.7
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 88.6
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 88.0
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 87.9
GTEX-1OJC4-0011-R1a-SM-F2TAZ 50-59 years, female 87.5
GTEX-1I19N-0011-R1b-SM-GOR1A 70-79 years, male 86.7
GTEX-14BMV-0011-R1b-SM-G9ERL 50-59 years, male 83.9
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 83.7
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 83.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 81.5
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 81.5
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 81.4
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 81.1
GTEX-1PPGY-0011-R1b-SM-G8LN3 60-69 years, male 81.1
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 81.0
GTEX-12ZZZ-0011-R1a-SM-GIN8I 60-69 years, male 79.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 79.6
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 79.1
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 77.3
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 77.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 76.2
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 76.0
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 75.5
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 75.0
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 73.8
GTEX-14JFF-0011-R1b-SM-G8W88 60-69 years, male 72.2
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 71.7
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 70.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 70.2
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 70.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 69.8
GTEX-1JMLX-0011-R1b-SM-G9ERV 50-59 years, male 69.3
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 69.0
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 68.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 67.9
GTEX-1QMI2-0011-R1b-SM-F3K5Q 60-69 years, male 67.7
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 67.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 66.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 66.5
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 65.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 64.4
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 63.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.1
GTEX-1R9PO-0011-R1b-SM-F2I2G 60-69 years, female 61.9
GTEX-1LVA9-0011-R1b-SM-F2TB5 50-59 years, male 61.7
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 61.7
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 61.4
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 58.4
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 58.2
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 57.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 57.2
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 56.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 56.4
GTEX-1QP6S-0011-R1b-SM-F3K59 40-49 years, male 55.6
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 55.3
GTEX-ZAK1-0011-R1a-SM-GRR1R 50-59 years, female 55.2
GTEX-ZYY3-0011-R1b-SM-GPI92 60-69 years, female 54.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 54.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 53.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 53.5
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 53.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 51.8
GTEX-1RNSC-0011-R1b-SM-F342D 60-69 years, male 51.7
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 50.5
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 50.2
GTEX-12ZZY-0011-R1a-SM-GIN9E 60-69 years, male 49.8
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 49.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 49.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 49.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 49.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 48.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 48.5
GTEX-1LVAO-0011-R1a-SM-F649O 60-69 years, male 48.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 47.2
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 46.6
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 46.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 43.9
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 43.2
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 42.8
GTEX-1KWVE-0011-R1a-SM-F649B 30-39 years, male 41.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 41.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 40.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 38.1
GTEX-1LSVX-0011-R1a-SM-F3K5F 60-69 years, male 37.2
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 36.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 36.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 35.5
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 34.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 33.7
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 33.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 33.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 32.8
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 32.3
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 31.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 30.7
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 29.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 29.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 29.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 28.5
GTEX-1JMQK-0011-R1a-SM-F6484 60-69 years, male 28.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 28.2
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 26.2
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 26.1
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 25.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 23.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 22.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 22.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 20.2
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 19.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 19.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 17.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 16.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 15.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 15.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 15.3
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 14.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 14.3
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 14.3
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 14.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 13.0
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 12.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 12.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 12.1
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 11.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 10.3
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 8.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 8.0
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 7.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 7.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 6.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 6.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 6.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 4.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 4.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 4.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 4.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 3.6
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 2.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 1.0
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HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

286.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 286.4
FF:10169-103B7 60 years, female 438.2
FF:10153-102I9 76 years, female 134.6

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