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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

198.671
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:45.1 nTPM
HPA Brain:79.5 nTPM
GTEx:45.1 nTPM
Pig:42.5 nTPM
Mouse:87.1 nTPM
Allen mouse:7.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB034931
Hypothalamus mean intensity 198.671
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 104.474
Mammillary nucleus 46.374
Periventricular hypothalamic nucleus 150.612
Supraoptic nucleus 137.696
Tuberal nucleus 54.209
Ventral tuberomammillary nucleus 98.452
Lateral preoptic area 41.956
Medial preoptic area 46.680
Suprachiasmatic nucleus 198.671
Paraventricular hypothalamic nucleus -
Anterior hypothalamic area, central 134.028
Ventral medial hypothalamic nucleus 87.153
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 126.277
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 56.455
Dorsal medial hypothalamic nucleus 148.084
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 73.4
2226 Male, age 75, left hemisphere 93.9
1961 Female, age 42, unknown 52.9
Dorsomedial nucleus
nTPM: 54.4
1989 Male, age 62, unknown 97.6
2017 Female, age 42, unknown 34.3
2041 Female, age 72, unknown 31.4
Lateral hypothalamic area
nTPM: 79.5
2228 Male, age 66, unknown 106.4
2271 Male, age 75, both hemispheres 101.9
1791 Male, age 80, right hemisphere 81.6
2412 Male, age 62, unknown 27.9
Mammillary body
nTPM: 17.9
2413 Male, age 66, unknown 28.1
1945 Male, age 80, right hemisphere 21.0
1923 Female, age 72, unknown 18.7
1948 Female, age 72, unknown 12.3
1834 Female, age 42, unknown 9.4
Paraventricular nucleus
nTPM: 37.1
2700 Male, age 62, unknown 37.1
Preoptic area
nTPM: 45.1
1907 Male, age 80, right hemisphere 78.3
2414 Female, age 72, unknown 31.5
1861 Female, age 42, unknown 25.7
Supraoptic nucleus
nTPM: 29.4
1894 Female, age 72, unknown 47.4
2835 Female, age 72, unknown 23.6
2043 Male, age 62, unknown 17.0
Ventromedial nucleus
nTPM: 70.1
1982 Female, age 72, unknown 81.8
1822 Female, age 42, unknown 58.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 45.1
Samples: 257

Max nTPM: 466.2
Min nTPM: 2.2
Std nTPM: 41.1
Median nTPM: 38.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 466.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 347.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 226.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 127.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 118.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 110.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 109.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 104.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 101.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 93.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 93.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 92.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 91.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 84.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 83.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 81.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 81.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 80.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 80.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 80.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 80.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 78.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 73.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 73.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 73.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 73.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 72.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 71.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 70.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 69.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 68.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 67.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 66.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 66.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 66.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 65.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 65.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 65.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 64.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 62.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 62.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 62.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 61.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 61.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 61.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 60.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 60.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 59.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 59.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 58.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 58.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 57.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 57.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 57.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 57.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 57.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 56.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 56.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 56.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 56.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 55.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 54.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 54.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 54.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 54.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 54.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 54.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 54.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 53.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 53.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 53.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 53.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 53.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 53.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 52.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 52.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 52.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 52.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 51.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 51.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 51.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 51.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 51.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 50.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 50.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 50.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 50.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 49.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 49.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 48.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 48.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 48.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 48.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 48.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 47.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 46.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 46.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 46.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 46.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 46.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 46.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 45.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 45.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 45.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 45.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 45.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 44.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 44.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 44.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 44.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 44.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 44.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 43.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 43.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 42.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 42.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 42.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 42.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 42.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 42.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 41.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 41.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 41.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 41.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 40.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 40.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 39.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 39.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 38.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 38.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 37.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 37.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 37.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 37.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 37.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 36.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 36.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 36.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 36.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 36.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 36.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 36.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 36.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 35.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 35.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 35.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 34.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 34.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 34.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 34.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 34.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 34.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 33.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 33.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 33.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 32.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 32.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 32.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 32.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 31.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 31.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 31.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 31.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 30.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 30.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 30.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 30.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 30.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 29.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 29.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 28.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 28.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 28.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 28.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 28.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 28.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 28.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 28.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 27.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 27.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 27.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 27.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 27.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 27.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 27.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 27.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 27.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 27.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 26.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 26.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 26.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 26.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 26.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 26.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 25.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 25.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 25.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 24.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 24.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 24.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 24.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 24.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 24.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 24.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 23.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 23.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 23.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 22.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 22.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 22.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 21.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 21.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 21.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 20.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 20.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 20.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 19.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 19.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 18.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 18.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 18.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 17.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 16.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 15.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 15.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 14.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 14.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 14.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 14.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 13.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 13.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 12.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 12.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 12.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 12.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 12.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 11.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 11.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 11.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 10.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 10.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 9.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 9.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 9.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 8.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 8.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 7.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 7.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 7.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 7.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 7.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 5.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 4.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 4.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 4.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 2.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 42.6
Samples: 4

Max nTPM: 71.8
Min nTPM: 26.9
Sample A Female 71.8
Sample B Female 37.5
Sample C Male 34.0
Sample D Male 26.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 87.1
Samples: 4

Max nTPM: 95.1
Min nTPM: 77.8
Sample A Male 93.8
Sample B Male 95.1
Sample C Female 77.8
Sample D Female 81.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.3
70743867 Antisense, RP_050725_01_G07, Mouse strain C57BL/6J (56 days, male) 10.2
634465 Antisense, RP_040914_01_B04, Mouse strain C57BL/6J (56 days, male) 4.3

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