We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TMEM144
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • TMEM144
TISSUE SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Tissue methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:218.6 nTPM
HPA Brain:283.4 nTPM
GTEx:218.6 nTPM
FANTOM5:572.4 Scaled Tags Per Million
Pig:110.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

283.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 214.4
1981 Female, age 72, midline 274.4
2048 Male, age 55, midline 257.7
2816 Male, age 47, midline 205.5
2194 Female, age 79, both hemispheres 204.9
2565 Male, age 75, midline 129.6
Cervical spinal cord, dorsal horn
nTPM: 283.4
2296 Male, age 66, both hemispheres 514.1
2173 Female, age 72, unknown 380.7
2069 Male, age 47, both hemispheres 300.4
1877 Male, age 55, unknown 223.2
2297 Male, age 75, both hemispheres 159.5
2721 Male, age 90, both hemispheres 122.6
Cervical spinal cord, ventral horn
nTPM: 228.4
2068 Male, age 55, unknown 294.0
2098 Female, age 72, unknown 284.0
2820 Female, age 79, both hemispheres 215.1
2480 Male, age 75, both hemispheres 200.4
2809 Male, age 90, both hemispheres 192.1
2295 Male, age 66, both hemispheres 184.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

218.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 218.6
Samples: 204

Max nTPM: 500.3
Min nTPM: 41.6
Std nTPM: 83.3
Median nTPM: 208.9
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 500.3
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 484.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 446.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 432.1
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 398.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 375.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 373.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 373.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 370.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 365.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 363.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 362.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 361.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 349.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 345.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 343.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 342.8
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 335.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 334.9
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 329.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 329.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 326.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 326.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 324.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 323.3
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 318.1
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 318.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 315.1
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 313.1
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 307.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 306.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 303.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 300.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 299.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 297.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 296.8
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 296.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 295.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 292.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 292.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 291.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 287.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 285.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 285.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 285.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 284.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 283.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 283.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 280.9
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 279.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 278.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 272.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 271.9
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 271.3
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 267.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 264.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 261.1
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 260.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 259.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 257.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 251.9
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 251.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 251.2
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 250.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 249.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 249.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 247.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 245.2
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 244.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 243.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 240.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 237.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 237.3
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 235.6
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 235.6
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 234.9
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 233.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 233.3
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 232.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 228.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 227.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 227.1
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 225.9
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 224.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 224.7
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 224.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 221.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 220.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 219.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 218.4
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 218.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 217.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 215.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 215.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 214.6
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 213.0
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 212.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 211.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 210.4
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 210.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 209.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 209.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 208.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 206.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 204.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 203.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 202.8
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 201.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 201.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 200.5
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 199.8
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 199.0
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 198.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 198.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 198.0
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 197.8
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 197.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 196.9
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 196.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 196.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 194.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 194.2
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 193.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 193.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 192.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 192.6
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 192.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 192.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 190.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 190.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 189.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 188.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 187.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 187.7
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 186.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 185.8
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 183.5
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 182.6
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 181.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 181.0
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 179.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 179.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 179.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 175.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 174.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 174.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 173.8
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 167.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 167.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 166.3
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 166.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 165.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 165.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 165.2
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 164.4
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 163.8
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 161.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 160.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 158.8
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 156.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 156.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 147.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 146.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 144.9
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 142.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 141.5
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 138.3
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 137.7
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 136.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 135.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 133.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 133.0
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 132.5
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 130.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 129.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 128.1
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 124.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 123.7
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 122.6
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 120.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 120.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 116.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 115.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 114.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 114.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 114.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 108.2
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 108.1
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 107.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 106.8
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 106.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 103.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 101.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 88.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 85.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 78.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 78.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 76.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 75.6
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 74.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 70.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 66.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 51.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 41.6
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

572.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 572.4
FF:10181-103D1 60 years, female 611.0
FF:10159-103A6 76 years, female 533.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 90.9
Samples: 4

Max nTPM: 106.3
Min nTPM: 73.8
Sample A Female 96.2
Sample B Female 106.3
Sample C Male 73.8
Sample D Male 87.4
Ventral spinal cord
nTPM: 110.2
Samples: 4

Max nTPM: 128.3
Min nTPM: 86.5
Sample A Female 116.4
Sample B Female 109.5
Sample C Male 86.5
Sample D Male 128.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo