HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:81.2 nTPM
HPA Brain:142.2 nTPM
GTEx:81.2 nTPM
FANTOM5:251.8 Scaled Tags Per Million
Pig:75.9 nTPM
Mouse:66.8 nTPM
Allen mouse:0.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020415
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 142.2
Sample id Sample description nTPM
Hippocampus
nTPM: 121.1
1855 Male, age 76, left hemisphere 147.4
1911 Female, age 85, right hemisphere 142.6
1898 Male, age 80, left hemisphere 127.2
2621 Female, age 67, right hemisphere 113.6
2148 Female, age 91, left hemisphere 99.3
2529 Female, age 94, left hemisphere 96.5
Dentate gyrus
nTPM: 135.6
2010 Male, age 76, both hemispheres 162.1
2530 Female, age 94, left hemisphere 159.4
1927 Female, age 91, both hemispheres 132.4
2531 Female, age 67, both hemispheres 125.2
2246 Female, age 85, both hemispheres 124.2
2528 Male, age 74, both hemispheres 110.6
Entorhinal gyrus
nTPM: 89.6
2117 Female, age 91, right hemisphere 152.2
2764 Male, age 80, right hemisphere 96.0
1938 Female, age 85, left hemisphere 89.8
1787 Male, age 76, left hemisphere 69.7
2613 Female, age 94, left hemisphere 69.4
2686 Male, age 75, right hemisphere 60.2
Hippocampus, CA1
nTPM: 142.2
2045 Male, age 76, both hemispheres 221.9
1873 Female, age 85, both hemispheres 173.8
2749 Male, age 80, left hemisphere 138.2
2527 Male, age 74, both hemispheres 94.1
2082 Female, age 91, right hemisphere 83.1
Hippocampus, CA2
nTPM: 124.1
1963 Male, age 80, left hemisphere 163.9
1892 Male, age 76, both hemispheres 154.0
2249 Male, age 74, both hemispheres 135.4
1940 Female, age 85, left hemisphere 106.4
2437 Female, age 94, left hemisphere 97.4
2113 Female, age 91, right hemisphere 87.4
Hippocampus, CA3
nTPM: 115.4
1891 Female, age 85, both hemispheres 178.3
2620 Female, age 94, left hemisphere 154.9
1867 Male, age 76, both hemispheres 137.8
2137 Male, age 80, left hemisphere 86.6
2436 Male, age 74, both hemispheres 76.0
2861 Female, age 67, both hemispheres 58.9
Parahippocampal cortex
nTPM: 82.8
1990 Female, age 91, right hemisphere 107.1
2532 Female, age 72, left hemisphere 101.0
2018 Male, age 76, both hemispheres 100.3
1933 Female, age 85, both hemispheres 90.3
2692 Male, age 74, both hemispheres 88.3
1850 Male, age 80, both hemispheres 87.4
2245 Female, age 91, both hemispheres 82.9
2693 Female, age 94, both hemispheres 76.8
2250 Female, age 67, right hemisphere 63.2
2622 Female, age 67, right hemisphere 31.1
Perirhinal gyrus
nTPM: 75.6
2521 Female, age 94, right hemisphere 83.9
1794 Male, age 80, right hemisphere 78.9
1841 Female, age 85, right hemisphere 78.8
2848 Male, age 76, right hemisphere 72.9
1847 Female, age 91, left hemisphere 63.5
Subiculum
nTPM: 128.5
2042 Male, age 76, both hemispheres 177.2
1901 Male, age 80, both hemispheres 156.1
1977 Female, age 85, both hemispheres 134.9
2438 Female, age 94, left hemisphere 117.7
2729 Female, age 91, right hemisphere 99.9
2619 Male, age 74, both hemispheres 85.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 81.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.2
Samples: 255

Max nTPM: 264.0
Min nTPM: 12.8
Std nTPM: 40.9
Median nTPM: 72.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 264.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 262.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 224.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 203.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 199.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 193.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 192.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 183.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 174.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 169.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 165.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 251.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 251.8
FF:10169-103B7 60 years, female 253.4
FF:10153-102I9 76 years, female 250.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 75.9
Pig sample Sample description nTPM
Subiculum
nTPM: 49.2
Samples: 4

Max nTPM: 52.6
Min nTPM: 46.3
Sample A Female 52.6
Sample B Female 49.5
Sample C Male 48.2
Sample D Male 46.3
Dorsal hippocampus
nTPM: 75.9
Samples: 4

Max nTPM: 96.6
Min nTPM: 49.7
Sample A Female 96.6
Sample B Female 68.1
Sample C Male 89.1
Sample D Male 49.7
Entorhinal cortex
nTPM: 54.4
Samples: 4

Max nTPM: 56.2
Min nTPM: 52.1
Sample A Female 56.0
Sample B Female 56.2
Sample C Male 52.1
Sample D Male 53.2
Ventral hippocampus
nTPM: 67.4
Samples: 4

Max nTPM: 76.7
Min nTPM: 50.4
Sample A Female 76.7
Sample B Female 50.4
Sample C Male 70.6
Sample D Male 72.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 66.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.8
Samples: 4

Max nTPM: 73.1
Min nTPM: 55.1
Sample A Male 73.1
Sample B Male 72.2
Sample C Female 55.1
Sample D Female 66.6
Hippocampal formation
nTPM: 51.5
Samples: 4

Max nTPM: 57.7
Min nTPM: 46.7
Sample A Male 48.5
Sample B Male 52.9
Sample C Female 57.7
Sample D Female 46.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
76003522 Antisense, RP_060608_02_F03, Mouse strain C57BL/6J (56 days, male) 0.3

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