HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:4.3 nTPM
HPA Brain:13.2 nTPM
GTEx:4.3 nTPM
FANTOM5:128.3 Scaled Tags Per Million
Pig:7.8 nTPM
Mouse:3.2 nTPM
Allen mouse:1.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB002168
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 13.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.4
2529 Female, age 94, left hemisphere 14.8
1911 Female, age 85, right hemisphere 11.7
1855 Male, age 76, left hemisphere 11.2
2621 Female, age 67, right hemisphere 10.5
1898 Male, age 80, left hemisphere 10.1
2148 Female, age 91, left hemisphere 9.8
Dentate gyrus
nTPM: 13.1
2530 Female, age 94, left hemisphere 20.1
2531 Female, age 67, both hemispheres 15.2
2528 Male, age 74, both hemispheres 11.5
2010 Male, age 76, both hemispheres 11.4
1927 Female, age 91, both hemispheres 10.4
2246 Female, age 85, both hemispheres 9.8
Entorhinal gyrus
nTPM: 11.3
2686 Male, age 75, right hemisphere 15.1
1787 Male, age 76, left hemisphere 13.5
2613 Female, age 94, left hemisphere 10.9
2764 Male, age 80, right hemisphere 10.0
2117 Female, age 91, right hemisphere 9.9
1938 Female, age 85, left hemisphere 8.4
Hippocampus, CA1
nTPM: 9.9
2527 Male, age 74, both hemispheres 11.7
2082 Female, age 91, right hemisphere 10.6
1873 Female, age 85, both hemispheres 10.3
2045 Male, age 76, both hemispheres 10.1
2749 Male, age 80, left hemisphere 6.9
Hippocampus, CA2
nTPM: 11.7
2437 Female, age 94, left hemisphere 16.3
1963 Male, age 80, left hemisphere 11.8
2113 Female, age 91, right hemisphere 11.3
2249 Male, age 74, both hemispheres 10.8
1892 Male, age 76, both hemispheres 10.0
1940 Female, age 85, left hemisphere 9.9
Hippocampus, CA3
nTPM: 13.2
2861 Female, age 67, both hemispheres 19.2
1867 Male, age 76, both hemispheres 14.5
2620 Female, age 94, left hemisphere 12.5
1891 Female, age 85, both hemispheres 11.5
2137 Male, age 80, left hemisphere 11.0
2436 Male, age 74, both hemispheres 10.4
Parahippocampal cortex
nTPM: 10.9
2018 Male, age 76, both hemispheres 15.9
2622 Female, age 67, right hemisphere 13.6
2692 Male, age 74, both hemispheres 11.9
2245 Female, age 91, both hemispheres 10.4
2532 Female, age 72, left hemisphere 10.4
1990 Female, age 91, right hemisphere 10.1
1850 Male, age 80, both hemispheres 9.9
2693 Female, age 94, both hemispheres 9.8
1933 Female, age 85, both hemispheres 8.6
2250 Female, age 67, right hemisphere 8.6
Perirhinal gyrus
nTPM: 9.4
2848 Male, age 76, right hemisphere 10.3
1794 Male, age 80, right hemisphere 9.8
1841 Female, age 85, right hemisphere 9.6
2521 Female, age 94, right hemisphere 9.2
1847 Female, age 91, left hemisphere 8.2
Subiculum
nTPM: 12.4
2042 Male, age 76, both hemispheres 15.6
2438 Female, age 94, left hemisphere 14.8
2619 Male, age 74, both hemispheres 12.6
2729 Female, age 91, right hemisphere 11.1
1901 Male, age 80, both hemispheres 10.0
1977 Female, age 85, both hemispheres 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 4.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.3
Samples: 255

Max nTPM: 31.9
Min nTPM: 0.3
Std nTPM: 3.9
Median nTPM: 3.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 31.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 27.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 21.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 20.4
GTEX-13PVQ-0011-R1b-SM-GJ3RQ 50-59 years, male 17.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 15.3
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 14.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 13.0
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 13.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 12.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 12.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 128.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.3
FF:10169-103B7 60 years, female 225.3
FF:10153-102I9 76 years, female 31.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 7.8
Pig sample Sample description nTPM
Subiculum
nTPM: 5.6
Samples: 4

Max nTPM: 6.7
Min nTPM: 3.4
Sample A Female 6.1
Sample B Female 3.4
Sample C Male 6.1
Sample D Male 6.7
Dorsal hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.1
Sample A Female 5.4
Sample B Female 4.2
Sample C Male 7.1
Sample D Male 4.1
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 9.8
Min nTPM: 5.6
Sample A Female 8.9
Sample B Female 6.9
Sample C Male 9.8
Sample D Male 5.6
Ventral hippocampus
nTPM: 7.1
Samples: 4

Max nTPM: 12.6
Min nTPM: 4.5
Sample A Female 5.4
Sample B Female 4.5
Sample C Male 12.6
Sample D Male 5.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 3.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.2
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.9
Sample A Male 3.4
Sample B Male 3.2
Sample C Female 2.9
Sample D Female 3.3
Hippocampal formation
nTPM: 2.8
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.5
Sample A Male 2.5
Sample B Male 2.7
Sample C Female 2.6
Sample D Female 3.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
75831750 Antisense, RP_060601_02_C11, Mouse strain C57BL/6J (56 days, male) 1.5

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