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  • SUMMARY

  • TISSUE

  • BRAIN

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  • CDK5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:48.8 nTPM
HPA Brain:45.9 nTPM
GTEx:48.8 nTPM
Mouse:75.6 nTPM
Allen mouse:16.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 33.6
2226 Male, age 75, left hemisphere 39.8
1961 Female, age 42, unknown 27.4
Dorsomedial nucleus
nTPM: 31.0
1989 Male, age 62, unknown 40.9
2041 Female, age 72, unknown 29.4
2017 Female, age 42, unknown 22.6
Lateral hypothalamic area
nTPM: 45.9
2228 Male, age 66, unknown 56.0
1791 Male, age 80, right hemisphere 47.4
2271 Male, age 75, both hemispheres 47.4
2412 Male, age 62, unknown 32.6
Mammillary body
nTPM: 34.3
1923 Female, age 72, unknown 52.9
2413 Male, age 66, unknown 36.5
1948 Female, age 72, unknown 29.3
1945 Male, age 80, right hemisphere 26.9
1834 Female, age 42, unknown 26.1
Paraventricular nucleus
nTPM: 30.2
2700 Male, age 62, unknown 30.2
Preoptic area
nTPM: 32.0
1907 Male, age 80, right hemisphere 41.4
2414 Female, age 72, unknown 28.4
1861 Female, age 42, unknown 26.1
Supraoptic nucleus
nTPM: 27.2
2835 Female, age 72, unknown 32.2
1894 Female, age 72, unknown 27.7
2043 Male, age 62, unknown 21.6
Ventromedial nucleus
nTPM: 35.4
1982 Female, age 72, unknown 42.3
1822 Female, age 42, unknown 28.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 48.8
Samples: 257

Max nTPM: 112.6
Min nTPM: 12.9
Std nTPM: 16.7
Median nTPM: 47.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 112.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 95.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 88.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 86.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 86.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 86.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 85.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 83.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 80.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 80.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 77.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 77.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 76.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 76.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 75.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 74.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 73.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 73.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 73.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 73.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 73.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 73.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 71.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 71.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 71.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 71.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 70.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 70.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 70.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 70.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 69.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 69.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 69.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 68.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 68.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 67.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 67.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 67.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 66.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 66.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 66.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 66.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 65.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 65.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 65.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 64.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 64.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 64.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 64.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 64.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 63.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 63.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 63.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 62.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 62.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 62.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 62.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 61.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 61.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 61.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 60.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 60.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 59.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 59.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 59.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 59.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 58.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 58.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 58.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 58.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 57.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 57.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 57.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 57.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 57.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 57.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 57.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 57.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 57.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 56.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 56.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 56.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 56.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 56.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 56.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 55.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 55.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 55.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 55.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 54.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 54.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 54.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 54.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 54.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 54.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 54.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 53.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 53.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 53.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 53.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 52.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 52.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 52.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 52.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 52.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 51.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 51.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 50.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 50.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 50.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 50.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 50.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 50.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 50.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 49.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 49.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 49.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 49.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 49.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 49.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 49.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 48.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 48.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 48.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 48.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 48.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 48.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 47.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 47.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 47.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 47.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 47.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 46.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 46.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 46.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 46.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 46.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 46.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 46.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 46.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 46.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 46.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 45.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 45.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 45.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 45.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 45.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 44.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 44.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 44.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 44.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 44.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 44.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 43.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 43.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 43.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 42.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 42.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 42.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 42.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 42.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 42.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 42.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 41.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 41.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 41.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 41.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 41.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 41.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 41.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 41.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 41.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 41.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 41.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 40.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 40.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 40.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 40.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 39.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 39.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 39.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 39.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 39.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 38.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 38.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 38.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 38.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 37.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 37.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 37.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 37.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 36.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 36.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 36.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 36.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 36.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 36.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 36.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 36.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 36.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 35.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 35.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 35.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 35.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 34.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 34.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 34.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 34.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 33.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 33.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 33.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 33.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 32.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 32.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 32.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 31.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 31.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 30.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 30.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 30.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 30.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 30.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 30.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 30.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 29.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 29.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 28.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 28.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 27.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 27.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 27.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 26.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 26.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 26.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 26.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 25.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 24.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 24.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 23.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 23.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 22.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 22.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 22.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 21.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 21.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 20.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 19.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 19.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 19.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 19.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 19.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 18.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 17.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 16.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 15.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 12.9
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 75.7
Samples: 4

Max nTPM: 81.8
Min nTPM: 70.4
Sample A Male 73.3
Sample B Male 81.8
Sample C Female 77.1
Sample D Female 70.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 16.2
245 Antisense, RP_Baylor_102682, Mouse strain C57BL/6J (56 days, male) 16.2
244 Antisense, RP_Baylor_102682, Mouse strain C57BL/6J (56 days, male) 4.1

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