HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:65.8 nTPM
HPA Brain:146.9 nTPM
GTEx:65.8 nTPM
FANTOM5:32.6 Scaled Tags Per Million
Pig:65.3 nTPM
Mouse:103.0 nTPM
Allen mouse:2.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058363Antibody HPA059577
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 146.9
Sample id Sample description nTPM
Hippocampus
nTPM: 130.4
2148 Female, age 91, left hemisphere 151.7
2529 Female, age 94, left hemisphere 138.1
1898 Male, age 80, left hemisphere 136.6
2621 Female, age 67, right hemisphere 133.3
1911 Female, age 85, right hemisphere 115.2
1855 Male, age 76, left hemisphere 107.7
Dentate gyrus
nTPM: 131.5
2531 Female, age 67, both hemispheres 176.6
1927 Female, age 91, both hemispheres 164.8
2528 Male, age 74, both hemispheres 125.7
2530 Female, age 94, left hemisphere 115.0
2010 Male, age 76, both hemispheres 106.6
2246 Female, age 85, both hemispheres 100.4
Entorhinal gyrus
nTPM: 122.4
2764 Male, age 80, right hemisphere 149.3
2613 Female, age 94, left hemisphere 136.8
1938 Female, age 85, left hemisphere 130.2
1787 Male, age 76, left hemisphere 108.4
2117 Female, age 91, right hemisphere 105.1
2686 Male, age 75, right hemisphere 104.3
Hippocampus, CA1
nTPM: 144.2
2749 Male, age 80, left hemisphere 217.1
2527 Male, age 74, both hemispheres 135.1
2082 Female, age 91, right hemisphere 127.7
1873 Female, age 85, both hemispheres 122.5
2045 Male, age 76, both hemispheres 118.7
Hippocampus, CA2
nTPM: 126.5
1963 Male, age 80, left hemisphere 191.1
2113 Female, age 91, right hemisphere 134.8
2437 Female, age 94, left hemisphere 116.8
1892 Male, age 76, both hemispheres 114.2
1940 Female, age 85, left hemisphere 101.6
2249 Male, age 74, both hemispheres 100.4
Hippocampus, CA3
nTPM: 146.9
2137 Male, age 80, left hemisphere 226.1
2620 Female, age 94, left hemisphere 177.6
2861 Female, age 67, both hemispheres 168.8
1867 Male, age 76, both hemispheres 122.0
1891 Female, age 85, both hemispheres 96.7
2436 Male, age 74, both hemispheres 90.3
Parahippocampal cortex
nTPM: 121.8
2245 Female, age 91, both hemispheres 163.6
2018 Male, age 76, both hemispheres 130.2
1933 Female, age 85, both hemispheres 128.9
1990 Female, age 91, right hemisphere 121.6
2250 Female, age 67, right hemisphere 120.4
1850 Male, age 80, both hemispheres 119.3
2622 Female, age 67, right hemisphere 115.8
2692 Male, age 74, both hemispheres 111.3
2693 Female, age 94, both hemispheres 109.9
2532 Female, age 72, left hemisphere 96.7
Perirhinal gyrus
nTPM: 130.8
1847 Female, age 91, left hemisphere 176.1
2521 Female, age 94, right hemisphere 129.0
1794 Male, age 80, right hemisphere 127.6
1841 Female, age 85, right hemisphere 111.1
2848 Male, age 76, right hemisphere 110.1
Subiculum
nTPM: 113.6
2729 Female, age 91, right hemisphere 135.3
1901 Male, age 80, both hemispheres 125.7
1977 Female, age 85, both hemispheres 115.9
2438 Female, age 94, left hemisphere 112.1
2619 Male, age 74, both hemispheres 102.6
2042 Male, age 76, both hemispheres 90.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 65.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.8
Samples: 255

Max nTPM: 201.2
Min nTPM: 16.3
Std nTPM: 32.3
Median nTPM: 61.0
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 201.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 168.6
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 163.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 158.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 152.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 143.1
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 140.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 138.7
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 137.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 135.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 133.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 32.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.6
FF:10153-102I9 76 years, female 36.1
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 65.3
Pig sample Sample description nTPM
Subiculum
nTPM: 53.9
Samples: 4

Max nTPM: 68.0
Min nTPM: 45.2
Sample A Female 68.0
Sample B Female 49.7
Sample C Male 52.7
Sample D Male 45.2
Dorsal hippocampus
nTPM: 51.8
Samples: 4

Max nTPM: 55.5
Min nTPM: 46.6
Sample A Female 55.5
Sample B Female 53.8
Sample C Male 51.2
Sample D Male 46.6
Entorhinal cortex
nTPM: 65.3
Samples: 4

Max nTPM: 67.4
Min nTPM: 63.9
Sample A Female 63.9
Sample B Female 67.4
Sample C Male 65.2
Sample D Male 64.6
Ventral hippocampus
nTPM: 52.1
Samples: 4

Max nTPM: 62.3
Min nTPM: 44.8
Sample A Female 44.8
Sample B Female 44.9
Sample C Male 62.3
Sample D Male 56.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 103.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 103.0
Samples: 4

Max nTPM: 110.2
Min nTPM: 93.7
Sample A Male 101.8
Sample B Male 106.4
Sample C Female 93.7
Sample D Female 110.2
Hippocampal formation
nTPM: 79.2
Samples: 4

Max nTPM: 86.9
Min nTPM: 73.4
Sample A Male 86.9
Sample B Male 81.1
Sample C Female 73.4
Sample D Female 75.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
72004450 Antisense, RP_050915_02_H05, Mouse strain C57BL/6J (56 days, male) 2.9

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