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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
58.1
Sample id
Sample description
nTPM
Amygdala nTPM: 36.8
2814
Male, age 76, right hemisphere
72.3
1987
Female, age 91, left hemisphere
42.5
2517
Female, age 94, left hemisphere
29.0
2695
Female, age 67, right hemisphere
21.1
2514
Male, age 75, right hemisphere
19.1
Basal amygdala nTPM: 44.8
2110
Male, age 80, left hemisphere
58.8
2243
Female, age 91, right hemisphere
52.7
2685
Female, age 94, left hemisphere
50.3
1955
Male, age 76, both hemispheres
43.2
2609
Male, age 75, right hemisphere
35.2
2827
Female, age 67, right hemisphere
28.6
Central amygdala nTPM: 58.1
1905
Male, age 76, both hemispheres
66.7
2701
Female, age 91, right hemisphere
66.0
2515
Male, age 75, right hemisphere
64.4
2239
Male, age 80, left hemisphere
53.9
2826
Female, age 94, left hemisphere
39.8
Corticomedial amygdala nTPM: 46.0
2429
Female, age 94, left hemisphere
58.6
2829
Male, age 80, left hemisphere
55.6
2240
Male, age 76, both hemispheres
47.0
2242
Female, age 91, right hemisphere
45.9
2428
Male, age 75, right hemisphere
45.3
2535
Female, age 67, right hemisphere
23.4
Lateral amygdala nTPM: 41.7
1883
Male, age 76, both hemispheres
71.0
2516
Male, age 75, right hemisphere
45.6
2255
Female, age 91, right hemisphere
43.4
2534
Female, age 94, left hemisphere
34.6
2256
Male, age 80, left hemisphere
31.4
2830
Female, age 67, right hemisphere
23.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
58.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 58.0
Samples: 181
Max nTPM: 134.9
Min nTPM: 23.3
Std nTPM: 24.0
Median nTPM: 51.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
134.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
127.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
120.9
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
120.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
115.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
112.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
111.2
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
111.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
110.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
106.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
105.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
104.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
104.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
103.7
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
100.8
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
96.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
93.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
93.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
89.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
88.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
88.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
87.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
86.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
86.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
84.3
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
83.2
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
81.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
81.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
80.6
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
80.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
80.1
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
79.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
79.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
78.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
78.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
78.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
77.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
77.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
77.3
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
77.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
77.2
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
76.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
76.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
75.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
74.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
73.4
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
73.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
72.0
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
70.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
70.5
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
70.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
69.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
69.5
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
69.1
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
69.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
68.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
68.3
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
67.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
67.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
67.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
66.2
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
66.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
66.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
65.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
65.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
64.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
64.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
62.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
62.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
61.6
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
61.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
60.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
59.8
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
59.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
59.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
58.3
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
58.2
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
56.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
55.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
55.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
54.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
54.0
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
53.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
53.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
53.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
52.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
52.1
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
51.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
51.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
51.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
51.4
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
50.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
50.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
50.0
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
49.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
49.6
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
49.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
49.0
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
48.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
48.3
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
47.5
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
47.2
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
47.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
46.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
46.5
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
46.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
46.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
45.8
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
45.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
45.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
45.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
44.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
44.6
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
43.6
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
43.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
43.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
43.1
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
42.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
42.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
42.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
42.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
41.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
41.8
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
41.6
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
41.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
41.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
40.9
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
40.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
40.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
40.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
40.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
40.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
40.4
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
40.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
40.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
39.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
38.4
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
37.7
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
37.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
37.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
37.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
37.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
37.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
37.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
36.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
35.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
35.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
35.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
35.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
35.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
35.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
35.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
34.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
34.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
34.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
34.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
34.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
33.9
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
33.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
33.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
33.5
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
33.2
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
33.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
32.8
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
32.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
32.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
31.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
31.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
31.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
31.0
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
30.9
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
30.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
30.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
30.2
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
30.1
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
28.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
27.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
27.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
26.2
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
26.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
23.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
30.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 30.0
Samples: 4
Max nTPM: 33.0
Min nTPM: 25.2
Sample A
Male
32.4
Sample B
Male
33.0
Sample C
Female
25.2
Sample D
Female
29.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.