HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:55.9 nTPM
HPA Brain:22.4 nTPM
GTEx:55.9 nTPM
FANTOM5:15.0 Scaled Tags Per Million
Pig:12.3 nTPM
Mouse:14.4 nTPM
Allen mouse:1.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003898Antibody CAB002163Antibody CAB016312
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 22.4
Sample id Sample description nTPM
Hippocampus
nTPM: 17.6
2529 Female, age 94, left hemisphere 19.9
2621 Female, age 67, right hemisphere 19.2
1911 Female, age 85, right hemisphere 19.1
1898 Male, age 80, left hemisphere 17.5
2148 Female, age 91, left hemisphere 17.3
1855 Male, age 76, left hemisphere 12.9
Dentate gyrus
nTPM: 19.0
2530 Female, age 94, left hemisphere 31.5
2531 Female, age 67, both hemispheres 20.5
2010 Male, age 76, both hemispheres 18.9
2246 Female, age 85, both hemispheres 15.6
2528 Male, age 74, both hemispheres 15.3
1927 Female, age 91, both hemispheres 12.2
Entorhinal gyrus
nTPM: 22.4
2117 Female, age 91, right hemisphere 29.9
2686 Male, age 75, right hemisphere 29.1
2764 Male, age 80, right hemisphere 23.4
2613 Female, age 94, left hemisphere 21.9
1938 Female, age 85, left hemisphere 15.9
1787 Male, age 76, left hemisphere 14.2
Hippocampus, CA1
nTPM: 14.6
2082 Female, age 91, right hemisphere 20.0
2527 Male, age 74, both hemispheres 15.5
2749 Male, age 80, left hemisphere 14.3
1873 Female, age 85, both hemispheres 13.3
2045 Male, age 76, both hemispheres 10.1
Hippocampus, CA2
nTPM: 18.6
1963 Male, age 80, left hemisphere 24.7
2113 Female, age 91, right hemisphere 21.4
2437 Female, age 94, left hemisphere 19.6
1940 Female, age 85, left hemisphere 17.7
2249 Male, age 74, both hemispheres 15.4
1892 Male, age 76, both hemispheres 12.7
Hippocampus, CA3
nTPM: 14.4
1891 Female, age 85, both hemispheres 22.2
2861 Female, age 67, both hemispheres 16.0
1867 Male, age 76, both hemispheres 15.9
2436 Male, age 74, both hemispheres 11.4
2137 Male, age 80, left hemisphere 11.1
2620 Female, age 94, left hemisphere 9.6
Parahippocampal cortex
nTPM: 16.4
2692 Male, age 74, both hemispheres 21.6
1990 Female, age 91, right hemisphere 20.4
2532 Female, age 72, left hemisphere 19.5
2018 Male, age 76, both hemispheres 17.8
2622 Female, age 67, right hemisphere 17.3
1850 Male, age 80, both hemispheres 16.0
2245 Female, age 91, both hemispheres 15.7
1933 Female, age 85, both hemispheres 14.0
2693 Female, age 94, both hemispheres 12.5
2250 Female, age 67, right hemisphere 9.3
Perirhinal gyrus
nTPM: 11.3
1847 Female, age 91, left hemisphere 13.2
2848 Male, age 76, right hemisphere 11.7
1794 Male, age 80, right hemisphere 10.9
1841 Female, age 85, right hemisphere 10.7
2521 Female, age 94, right hemisphere 9.8
Subiculum
nTPM: 21.7
2042 Male, age 76, both hemispheres 27.2
1901 Male, age 80, both hemispheres 25.7
2438 Female, age 94, left hemisphere 22.0
1977 Female, age 85, both hemispheres 20.8
2729 Female, age 91, right hemisphere 17.5
2619 Male, age 74, both hemispheres 17.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 55.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.9
Samples: 255

Max nTPM: 230.6
Min nTPM: 12.5
Std nTPM: 35.2
Median nTPM: 46.7
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 230.6
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 217.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 207.0
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 196.2
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 194.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 148.1
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 143.0
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 142.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 131.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 129.5
GTEX-1LSNL-0011-R1a-SM-F3K51 50-59 years, male 126.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 15.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.0
FF:10153-102I9 76 years, female 21.7
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 12.3
Pig sample Sample description nTPM
Subiculum
nTPM: 11.5
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.8
Sample A Female 13.6
Sample B Female 12.2
Sample C Male 10.5
Sample D Male 9.8
Dorsal hippocampus
nTPM: 12.2
Samples: 4

Max nTPM: 14.8
Min nTPM: 10.2
Sample A Female 14.8
Sample B Female 11.1
Sample C Male 12.5
Sample D Male 10.2
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 11.5
Min nTPM: 7.9
Sample A Female 9.6
Sample B Female 11.2
Sample C Male 11.5
Sample D Male 7.9
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.6
Sample A Female 11.5
Sample B Female 10.6
Sample C Male 14.5
Sample D Male 12.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 13.6
Min nTPM: 8.8
Sample A Male 8.8
Sample B Male 12.4
Sample C Female 13.6
Sample D Female 11.7
Hippocampal formation
nTPM: 14.5
Samples: 4

Max nTPM: 15.6
Min nTPM: 12.2
Sample A Male 12.2
Sample B Male 14.5
Sample C Female 15.6
Sample D Female 15.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
77464988 Antisense, RP_070129_02_F11, Mouse strain C57BL/6J (56 days, male) 1.0

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