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  • SUMMARY

  • TISSUE

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  • TMED3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:39.2 nTPM
HPA Brain:49.9 nTPM
GTEx:39.2 nTPM
Pig:9.5 nTPM
Mouse:56.1 nTPM
Allen mouse:1.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 49.9
2226 Male, age 75, left hemisphere 65.0
1961 Female, age 42, unknown 34.9
Dorsomedial nucleus
nTPM: 30.0
2041 Female, age 72, unknown 40.2
1989 Male, age 62, unknown 25.4
2017 Female, age 42, unknown 24.3
Lateral hypothalamic area
nTPM: 39.0
1791 Male, age 80, right hemisphere 45.8
2271 Male, age 75, both hemispheres 39.4
2228 Male, age 66, unknown 38.1
2412 Male, age 62, unknown 32.5
Mammillary body
nTPM: 22.6
1923 Female, age 72, unknown 26.5
2413 Male, age 66, unknown 25.9
1945 Male, age 80, right hemisphere 21.2
1834 Female, age 42, unknown 19.6
1948 Female, age 72, unknown 19.6
Paraventricular nucleus
nTPM: 24.4
2700 Male, age 62, unknown 24.4
Preoptic area
nTPM: 27.6
1907 Male, age 80, right hemisphere 33.4
2414 Female, age 72, unknown 28.3
1861 Female, age 42, unknown 20.9
Supraoptic nucleus
nTPM: 38.7
2835 Female, age 72, unknown 51.1
1894 Female, age 72, unknown 32.8
2043 Male, age 62, unknown 32.2
Ventromedial nucleus
nTPM: 29.6
1822 Female, age 42, unknown 30.1
1982 Female, age 72, unknown 29.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 39.2
Samples: 257

Max nTPM: 160.0
Min nTPM: 10.3
Std nTPM: 20.7
Median nTPM: 34.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 160.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 103.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 94.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 92.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 91.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 90.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 89.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 89.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 88.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 84.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 82.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 78.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 78.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 76.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 73.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 73.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 72.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 72.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 72.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 72.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 70.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 70.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 68.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 68.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 68.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 67.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 67.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 66.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 64.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 64.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 64.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 63.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 63.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 62.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 62.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 62.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 60.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 60.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 59.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 59.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 59.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 57.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 57.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 57.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 56.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 55.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 55.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 54.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 54.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 54.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 54.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 54.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 54.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 54.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 53.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 53.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 53.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 52.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 52.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 52.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 52.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 52.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 51.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 50.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 50.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 49.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 49.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 48.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 48.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 48.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 48.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 48.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 47.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 47.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 47.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 46.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 46.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 46.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 46.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 46.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 46.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 46.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 45.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 45.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 45.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 44.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 44.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 44.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 43.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 43.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 43.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 43.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 43.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 42.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 42.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 41.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 41.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 41.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 40.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 40.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 40.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 40.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 40.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 39.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 39.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 38.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 37.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 37.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 37.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 37.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 37.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 37.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 37.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 37.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 37.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 37.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 36.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 36.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 36.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 35.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 35.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 35.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 35.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 35.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 35.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 35.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 35.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 35.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 34.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 34.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 34.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 34.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 34.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 34.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 34.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 34.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 33.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 33.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 33.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 33.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 33.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 33.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 33.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 33.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 32.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 32.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 32.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 31.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 31.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 31.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 31.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 30.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 30.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 30.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 30.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 29.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 29.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 29.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 29.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 29.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 29.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 29.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 28.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 28.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 28.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 28.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 28.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 27.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 27.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 27.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 27.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 27.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 27.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 27.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 27.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 27.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 26.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 26.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 26.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 26.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 26.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 25.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 25.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 25.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 25.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 25.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 25.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 25.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 25.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 25.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 25.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 25.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 24.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 24.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 24.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 24.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 24.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 24.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 24.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 23.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 23.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 22.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 22.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 22.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 21.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 21.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 21.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 21.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 21.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 21.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 21.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 21.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 20.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 20.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 20.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 19.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 19.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 19.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 19.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 19.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 18.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 18.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 18.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 18.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 17.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 17.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 17.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 17.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 17.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 17.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 16.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 16.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 16.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 16.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 16.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 16.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 15.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 15.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 15.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 15.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 15.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 15.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 14.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 13.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 13.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 13.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 13.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 13.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 12.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 12.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 12.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 12.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 12.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 12.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 11.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 10.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 10.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 9.5
Samples: 4

Max nTPM: 11.4
Min nTPM: 7.8
Sample A Female 9.0
Sample B Female 7.8
Sample C Male 11.4
Sample D Male 9.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 56.1
Samples: 4

Max nTPM: 62.0
Min nTPM: 51.8
Sample A Male 55.8
Sample B Male 62.0
Sample C Female 54.9
Sample D Female 51.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.8
68441490 Antisense, RP_041214_02_D12, Mouse strain C57BL/6J (56 days, male) 2.4
71015196 Antisense, RP_050725_02_G04, Mouse strain C57BL/6J (56 days, male) 1.2

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