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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Low
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:596.1 nTPM
HPA:596.1 nTPM
GTEx:459.0 nTPM
FANTOM5:602.6 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA012720Antibody CAB011487
Follicle cells -Low
Ovarian stroma cells MediumMedium





OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

596.1
overview
Female, age 64
Ovary sample 192
nTPM: 341.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 376.2
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 357.4
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 446.1
N/A
Female, age 16
Ovary sample 3663
nTPM: 1079.1
N/A
Female, age 20
Ovary sample 3664
nTPM: 665.7
N/A
Female, age 32
Ovary sample 3665
nTPM: 906.4

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

459.0
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 459.0
Samples: 193

Max nTPM: 1049.6
Min nTPM: 255.8
Std nTPM: 116.9
Median nTPM: 437.3
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 1049.6
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 823.8
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 767.2
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 760.1
GTEX-14JG6-0626-SM-68716 30-39 years, female 751.8
GTEX-15EOM-1526-SM-68723 20-29 years, female 731.4
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 715.7
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 702.4
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 698.1
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 687.5
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 673.7
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 672.5
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 666.4
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 653.4
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 651.9
GTEX-R55G-1526-SM-48FER 40-49 years, female 649.3
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 646.0
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 639.2
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 610.3
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 609.2
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 602.7
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 597.9
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 592.5
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 591.8
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 588.2
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 584.2
GTEX-13SLX-2426-SM-664OM 50-59 years, female 578.2
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 575.4
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 570.6
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 563.5
GTEX-145ME-1226-SM-5MR87 40-49 years, female 563.0
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 561.6
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 559.5
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 559.4
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 557.6
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 556.7
GTEX-QCQG-1426-SM-48U22 50-59 years, female 552.4
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 546.4
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 544.7
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 543.8
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 541.2
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 540.7
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 537.5
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 536.9
GTEX-14PKV-1226-SM-6871T 20-29 years, female 535.4
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 534.4
GTEX-R45C-2526-SM-GRR28 60-69 years, female 525.4
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 523.8
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 518.3
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 516.7
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 515.7
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 502.0
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 499.5
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 492.6
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 489.8
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 489.6
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 486.1
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 485.0
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 484.5
GTEX-RU72-2226-SM-46MUE 50-59 years, female 482.5
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 480.0
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 479.6
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 479.5
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 478.9
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 477.7
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 476.8
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 476.0
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 475.4
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 472.7
GTEX-11I78-1926-SM-59878 50-59 years, female 472.6
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 472.6
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 472.5
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 471.3
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 468.8
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 466.3
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 466.1
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 465.1
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 463.3
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 461.2
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 459.5
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 457.9
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 456.3
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 455.0
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 453.7
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 453.3
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 453.3
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 452.3
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 451.6
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 450.3
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 449.1
GTEX-S32W-1226-SM-4AD67 50-59 years, female 449.1
GTEX-S341-0726-SM-4AD5R 40-49 years, female 447.5
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 445.7
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 442.4
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 441.9
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 437.3
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 437.3
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 436.2
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 435.8
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 435.8
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 435.6
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 435.1
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 430.8
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 429.9
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 429.7
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 426.6
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 425.9
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 421.9
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 420.6
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 418.4
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 416.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 415.7
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 414.8
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 412.7
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 411.2
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 411.0
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 410.0
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 409.3
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 405.6
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 404.7
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 402.0
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 401.8
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 401.0
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 400.7
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 396.7
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 395.1
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 395.1
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 395.1
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 393.4
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 392.5
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 390.7
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 390.1
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 389.4
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 388.5
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 388.3
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 387.6
GTEX-P78B-1926-SM-3P616 40-49 years, female 386.2
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 385.8
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 384.3
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 383.3
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 383.3
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 382.7
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 381.8
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 381.5
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 381.4
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 381.0
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 379.6
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 379.3
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 379.0
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 376.3
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 376.3
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 375.3
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 374.8
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 374.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 373.2
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 367.0
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 365.9
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 364.9
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 364.6
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 363.4
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 361.0
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 360.7
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 357.9
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 354.6
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 353.2
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 352.5
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 351.7
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 351.7
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 351.5
GTEX-183WM-1926-SM-72D5F 70-79 years, female 350.2
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 349.5
GTEX-QVJO-3126-SM-COH22 60-69 years, female 344.9
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 340.7
GTEX-14BIN-1426-SM-664NI 50-59 years, female 339.2
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 322.9
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 319.1
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 318.8
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 316.6
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 314.2
GTEX-Q734-0726-SM-48TZP 40-49 years, female 314.1
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 314.0
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 310.8
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 310.4
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 310.1
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 307.7
GTEX-18D9A-0826-SM-718C1 30-39 years, female 303.8
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 303.3
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 300.6
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 300.3
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 287.4
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 286.4
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 262.6
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 255.8
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OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

602.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 602.6
FF:10020-101D2 47,75,84 years, female 602.6

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