HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.4 nTPM
HPA Brain:17.7 nTPM
GTEx:11.4 nTPM
FANTOM5:1.7 Scaled Tags Per Million
Pig:5.9 nTPM
Mouse:0.0 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 17.7
Sample id Sample description nTPM
Hippocampus
nTPM: 12.3
1898 Male, age 80, left hemisphere 17.2
2529 Female, age 94, left hemisphere 13.4
1855 Male, age 76, left hemisphere 13.1
2148 Female, age 91, left hemisphere 11.9
2621 Female, age 67, right hemisphere 9.2
1911 Female, age 85, right hemisphere 8.9
Dentate gyrus
nTPM: 14.2
2530 Female, age 94, left hemisphere 16.6
2010 Male, age 76, both hemispheres 15.8
2528 Male, age 74, both hemispheres 13.7
2531 Female, age 67, both hemispheres 13.5
1927 Female, age 91, both hemispheres 12.8
2246 Female, age 85, both hemispheres 12.6
Entorhinal gyrus
nTPM: 14.2
2764 Male, age 80, right hemisphere 20.4
1938 Female, age 85, left hemisphere 15.9
1787 Male, age 76, left hemisphere 15.1
2117 Female, age 91, right hemisphere 13.0
2613 Female, age 94, left hemisphere 11.8
2686 Male, age 75, right hemisphere 9.3
Hippocampus, CA1
nTPM: 14.5
2749 Male, age 80, left hemisphere 18.3
2045 Male, age 76, both hemispheres 17.0
1873 Female, age 85, both hemispheres 14.2
2527 Male, age 74, both hemispheres 11.7
2082 Female, age 91, right hemisphere 11.2
Hippocampus, CA2
nTPM: 12.7
2113 Female, age 91, right hemisphere 14.2
2249 Male, age 74, both hemispheres 13.4
1892 Male, age 76, both hemispheres 13.0
1940 Female, age 85, left hemisphere 12.4
1963 Male, age 80, left hemisphere 12.0
2437 Female, age 94, left hemisphere 11.4
Hippocampus, CA3
nTPM: 11.8
2620 Female, age 94, left hemisphere 16.0
2861 Female, age 67, both hemispheres 15.3
2137 Male, age 80, left hemisphere 10.3
2436 Male, age 74, both hemispheres 10.1
1867 Male, age 76, both hemispheres 9.7
1891 Female, age 85, both hemispheres 9.4
Parahippocampal cortex
nTPM: 13.8
1933 Female, age 85, both hemispheres 18.7
2018 Male, age 76, both hemispheres 16.7
2250 Female, age 67, right hemisphere 15.9
1850 Male, age 80, both hemispheres 15.2
1990 Female, age 91, right hemisphere 13.9
2245 Female, age 91, both hemispheres 13.6
2622 Female, age 67, right hemisphere 12.6
2532 Female, age 72, left hemisphere 12.4
2693 Female, age 94, both hemispheres 10.8
2692 Male, age 74, both hemispheres 8.5
Perirhinal gyrus
nTPM: 17.7
1847 Female, age 91, left hemisphere 20.8
1794 Male, age 80, right hemisphere 20.4
2521 Female, age 94, right hemisphere 18.4
2848 Male, age 76, right hemisphere 14.4
1841 Female, age 85, right hemisphere 14.2
Subiculum
nTPM: 10.3
1977 Female, age 85, both hemispheres 15.0
2729 Female, age 91, right hemisphere 13.5
2619 Male, age 74, both hemispheres 10.1
1901 Male, age 80, both hemispheres 9.0
2042 Male, age 76, both hemispheres 7.8
2438 Female, age 94, left hemisphere 6.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.4
Samples: 255

Max nTPM: 40.9
Min nTPM: 1.6
Std nTPM: 6.5
Median nTPM: 10.4
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 40.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 38.7
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 34.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 31.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 29.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 28.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 27.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 26.6
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 25.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 25.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.7
FF:10153-102I9 76 years, female 2.5
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 5.9
Pig sample Sample description nTPM
Subiculum
nTPM: 4.2
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.6
Sample A Female 5.1
Sample B Female 4.5
Sample C Male 3.7
Sample D Male 3.6
Dorsal hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 8.2
Min nTPM: 4.2
Sample A Female 8.2
Sample B Female 6.6
Sample C Male 4.2
Sample D Male 4.5
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 5.6
Min nTPM: 3.6
Sample A Female 4.8
Sample B Female 4.6
Sample C Male 5.6
Sample D Male 3.6
Ventral hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.1
Sample A Female 4.3
Sample B Female 4.1
Sample C Male 6.8
Sample D Male 5.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
72081665 Antisense, RP_051012_04_H08, Mouse strain C57BL/6J (56 days, male) 0.0

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