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  • TISSUE

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  • SCG5
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:182.5 nTPM
HPA Brain:130.8 nTPM
GTEx:182.5 nTPM
Pig:123.2 nTPM
Mouse:325.0 nTPM
Allen mouse:25.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 130.8
2226 Male, age 75, left hemisphere 219.0
1961 Female, age 42, unknown 42.6
Dorsomedial nucleus
nTPM: 39.7
2041 Female, age 72, unknown 43.3
1989 Male, age 62, unknown 38.7
2017 Female, age 42, unknown 37.1
Lateral hypothalamic area
nTPM: 91.9
2228 Male, age 66, unknown 142.3
2271 Male, age 75, both hemispheres 110.9
1791 Male, age 80, right hemisphere 77.3
2412 Male, age 62, unknown 37.2
Mammillary body
nTPM: 50.5
1923 Female, age 72, unknown 99.0
1948 Female, age 72, unknown 42.6
2413 Male, age 66, unknown 42.5
1945 Male, age 80, right hemisphere 41.2
1834 Female, age 42, unknown 27.1
Paraventricular nucleus
nTPM: 32.3
2700 Male, age 62, unknown 32.3
Preoptic area
nTPM: 52.1
1907 Male, age 80, right hemisphere 72.9
1861 Female, age 42, unknown 42.5
2414 Female, age 72, unknown 40.8
Supraoptic nucleus
nTPM: 54.7
1894 Female, age 72, unknown 72.1
2835 Female, age 72, unknown 52.7
2043 Male, age 62, unknown 39.2
Ventromedial nucleus
nTPM: 60.6
1982 Female, age 72, unknown 64.6
1822 Female, age 42, unknown 56.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

182.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 182.5
Samples: 257

Max nTPM: 466.6
Min nTPM: 29.7
Std nTPM: 78.4
Median nTPM: 184.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 466.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 401.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 373.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 368.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 358.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 342.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 332.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 331.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 325.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 318.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 307.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 305.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 304.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 302.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 299.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 294.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 293.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 292.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 291.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 290.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 289.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 288.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 286.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 286.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 286.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 286.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 284.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 283.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 278.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 278.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 277.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 275.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 275.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 275.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 274.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 274.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 274.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 270.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 268.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 266.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 266.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 266.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 263.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 263.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 260.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 256.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 256.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 256.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 255.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 254.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 251.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 251.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 251.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 250.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 250.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 249.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 245.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 244.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 242.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 241.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 240.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 240.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 239.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 239.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 239.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 239.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 237.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 235.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 233.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 232.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 231.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 230.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 230.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 229.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 228.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 227.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 225.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 225.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 224.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 224.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 223.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 223.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 223.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 218.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 218.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 216.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 216.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 216.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 214.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 213.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 212.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 212.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 211.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 210.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 210.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 209.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 208.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 207.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 205.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 201.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 200.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 200.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 200.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 199.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 198.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 197.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 197.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 197.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 197.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 195.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 195.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 194.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 194.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 193.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 192.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 192.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 191.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 191.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 190.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 189.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 188.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 188.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 188.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 188.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 186.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 186.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 185.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 184.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 184.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 183.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 182.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 182.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 181.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 181.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 180.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 179.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 179.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 177.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 176.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 175.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 175.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 174.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 174.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 173.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 172.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 172.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 168.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 168.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 167.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 165.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 165.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 164.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 163.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 162.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 161.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 161.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 159.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 159.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 158.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 154.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 152.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 151.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 151.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 150.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 149.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 147.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 146.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 143.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 140.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 139.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 136.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 135.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 135.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 135.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 135.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 135.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 134.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 134.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 133.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 133.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 133.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 132.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 130.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 127.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 126.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 126.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 124.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 123.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 123.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 123.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 122.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 121.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 120.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 116.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 114.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 114.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 114.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 114.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 113.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 113.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 113.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 112.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 111.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 111.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 111.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 111.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 109.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 108.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 108.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 107.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 107.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 105.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 102.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 102.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 102.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 101.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 97.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 97.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 94.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 94.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 93.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 93.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 91.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 88.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 86.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 85.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 84.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 83.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 81.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 78.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 75.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 74.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 73.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 73.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 72.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 71.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 71.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 70.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 69.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 68.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 66.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 65.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 64.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 64.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 63.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 60.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 51.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 51.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 50.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 49.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 45.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 44.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 42.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 41.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 40.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 39.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 29.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 123.2
Samples: 4

Max nTPM: 146.0
Min nTPM: 102.4
Sample A Female 146.0
Sample B Female 102.4
Sample C Male 120.3
Sample D Male 124.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

325.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 325.1
Samples: 4

Max nTPM: 348.4
Min nTPM: 302.7
Sample A Male 338.1
Sample B Male 348.4
Sample C Female 311.0
Sample D Female 302.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

25.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 25.6
71608208 Antisense, RP_050927_01_B04, Mouse strain C57BL/6J (56 days, male) 26.9
75773511 Antisense, RP_060530_01_A01, Mouse strain C57BL/6J (56 days, male) 24.3

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