HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:11.2 nTPM
HPA Brain:31.4 nTPM
GTEx:11.2 nTPM
FANTOM5:67.4 Scaled Tags Per Million
Pig:23.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021178Antibody HPA021230Antibody HPA021799Antibody CAB015421
Glial cells Not detectedLowNot detectedNot detected
Neuronal cells MediumHighLowMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 31.4
Sample id Sample description nTPM
Hippocampus
nTPM: 29.3
2621 Female, age 67, right hemisphere 32.2
2148 Female, age 91, left hemisphere 31.0
1898 Male, age 80, left hemisphere 30.1
2529 Female, age 94, left hemisphere 29.8
1855 Male, age 76, left hemisphere 27.7
1911 Female, age 85, right hemisphere 24.9
Dentate gyrus
nTPM: 28.7
2010 Male, age 76, both hemispheres 31.8
2530 Female, age 94, left hemisphere 29.9
1927 Female, age 91, both hemispheres 29.2
2528 Male, age 74, both hemispheres 28.9
2246 Female, age 85, both hemispheres 27.6
2531 Female, age 67, both hemispheres 24.9
Entorhinal gyrus
nTPM: 29.9
2686 Male, age 75, right hemisphere 32.0
2613 Female, age 94, left hemisphere 30.7
2764 Male, age 80, right hemisphere 30.2
2117 Female, age 91, right hemisphere 29.5
1938 Female, age 85, left hemisphere 29.1
1787 Male, age 76, left hemisphere 28.0
Hippocampus, CA1
nTPM: 31.4
2749 Male, age 80, left hemisphere 37.6
2527 Male, age 74, both hemispheres 34.1
2082 Female, age 91, right hemisphere 30.4
1873 Female, age 85, both hemispheres 29.4
2045 Male, age 76, both hemispheres 25.5
Hippocampus, CA2
nTPM: 31.2
1963 Male, age 80, left hemisphere 38.4
2249 Male, age 74, both hemispheres 32.9
1892 Male, age 76, both hemispheres 32.5
2437 Female, age 94, left hemisphere 29.0
2113 Female, age 91, right hemisphere 27.4
1940 Female, age 85, left hemisphere 27.0
Hippocampus, CA3
nTPM: 30.8
2436 Male, age 74, both hemispheres 42.4
2137 Male, age 80, left hemisphere 31.5
2620 Female, age 94, left hemisphere 29.3
1867 Male, age 76, both hemispheres 28.8
1891 Female, age 85, both hemispheres 28.2
2861 Female, age 67, both hemispheres 24.8
Parahippocampal cortex
nTPM: 29.3
1933 Female, age 85, both hemispheres 33.4
1850 Male, age 80, both hemispheres 31.8
1990 Female, age 91, right hemisphere 29.6
2018 Male, age 76, both hemispheres 29.6
2245 Female, age 91, both hemispheres 29.2
2250 Female, age 67, right hemisphere 28.6
2622 Female, age 67, right hemisphere 28.5
2692 Male, age 74, both hemispheres 28.4
2532 Female, age 72, left hemisphere 27.7
2693 Female, age 94, both hemispheres 25.8
Perirhinal gyrus
nTPM: 31.4
1847 Female, age 91, left hemisphere 34.6
1841 Female, age 85, right hemisphere 32.2
1794 Male, age 80, right hemisphere 30.7
2521 Female, age 94, right hemisphere 30.2
2848 Male, age 76, right hemisphere 29.3
Subiculum
nTPM: 29.3
2438 Female, age 94, left hemisphere 32.4
2619 Male, age 74, both hemispheres 31.6
1901 Male, age 80, both hemispheres 29.9
1977 Female, age 85, both hemispheres 28.2
2042 Male, age 76, both hemispheres 27.3
2729 Female, age 91, right hemisphere 26.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.2
Samples: 255

Max nTPM: 18.3
Min nTPM: 5.5
Std nTPM: 2.4
Median nTPM: 11.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 18.3
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 17.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 17.4
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 16.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 16.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 16.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 16.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 16.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 16.0
GTEX-1MCQQ-0011-R1a-SM-F341G 60-69 years, male 16.0
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 15.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 67.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.4
FF:10169-103B7 60 years, female 73.7
FF:10153-102I9 76 years, female 61.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 23.5
Pig sample Sample description nTPM
Subiculum
nTPM: 22.9
Samples: 4

Max nTPM: 29.5
Min nTPM: 19.3
Sample A Female 29.5
Sample B Female 20.3
Sample C Male 22.6
Sample D Male 19.3
Dorsal hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 25.3
Min nTPM: 18.6
Sample A Female 25.3
Sample B Female 22.8
Sample C Male 23.5
Sample D Male 18.6
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 25.1
Min nTPM: 20.7
Sample A Female 21.9
Sample B Female 25.1
Sample C Male 23.6
Sample D Male 20.7
Ventral hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 29.9
Min nTPM: 18.7
Sample A Female 21.3
Sample B Female 18.7
Sample C Male 29.9
Sample D Male 24.0

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