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  • TISSUE

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  • GPX4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:454.3 nTPM
HPA Brain:363.2 nTPM
GTEx:454.3 nTPM
Pig:256.0 nTPM
Mouse:524.7 nTPM
Allen mouse:11.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

363.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 324.4
2226 Male, age 75, left hemisphere 390.2
1961 Female, age 42, unknown 258.7
Dorsomedial nucleus
nTPM: 296.2
1989 Male, age 62, unknown 335.1
2041 Female, age 72, unknown 308.7
2017 Female, age 42, unknown 244.9
Lateral hypothalamic area
nTPM: 358.9
1791 Male, age 80, right hemisphere 412.9
2271 Male, age 75, both hemispheres 377.6
2228 Male, age 66, unknown 330.5
2412 Male, age 62, unknown 314.6
Mammillary body
nTPM: 363.2
1923 Female, age 72, unknown 450.5
1948 Female, age 72, unknown 360.5
2413 Male, age 66, unknown 342.0
1834 Female, age 42, unknown 333.6
1945 Male, age 80, right hemisphere 329.5
Paraventricular nucleus
nTPM: 339.7
2700 Male, age 62, unknown 339.7
Preoptic area
nTPM: 297.4
1907 Male, age 80, right hemisphere 320.7
1861 Female, age 42, unknown 293.4
2414 Female, age 72, unknown 278.1
Supraoptic nucleus
nTPM: 310.6
2835 Female, age 72, unknown 329.6
2043 Male, age 62, unknown 307.1
1894 Female, age 72, unknown 295.1
Ventromedial nucleus
nTPM: 277.6
1982 Female, age 72, unknown 315.0
1822 Female, age 42, unknown 240.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

454.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 454.3
Samples: 257

Max nTPM: 961.9
Min nTPM: 212.0
Std nTPM: 105.7
Median nTPM: 442.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 961.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 926.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 880.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 837.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 766.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 724.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 705.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 698.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 665.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 659.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 649.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 643.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 641.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 639.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 622.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 618.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 617.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 616.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 613.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 612.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 611.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 609.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 598.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 596.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 595.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 592.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 590.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 571.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 570.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 568.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 567.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 567.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 565.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 565.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 559.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 559.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 556.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 550.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 547.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 545.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 535.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 533.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 531.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 529.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 529.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 528.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 524.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 523.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 521.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 519.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 519.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 518.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 517.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 513.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 512.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 512.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 511.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 509.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 507.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 506.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 505.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 501.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 499.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 499.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 497.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 495.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 494.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 491.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 489.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 489.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 488.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 486.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 483.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 480.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 478.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 478.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 478.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 476.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 475.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 475.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 475.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 473.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 473.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 472.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 472.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 472.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 469.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 468.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 465.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 465.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 465.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 464.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 462.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 462.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 461.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 460.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 459.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 459.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 458.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 457.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 456.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 456.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 454.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 454.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 454.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 452.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 452.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 450.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 450.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 450.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 449.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 449.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 449.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 448.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 448.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 447.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 446.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 446.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 446.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 445.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 444.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 444.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 444.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 444.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 444.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 443.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 443.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 443.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 442.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 442.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 441.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 440.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 439.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 436.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 435.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 434.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 433.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 432.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 432.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 431.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 431.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 430.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 429.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 428.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 427.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 427.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 426.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 426.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 424.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 424.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 423.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 423.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 420.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 417.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 417.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 417.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 416.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 416.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 416.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 415.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 415.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 414.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 413.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 413.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 413.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 412.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 412.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 411.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 411.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 410.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 410.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 410.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 408.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 404.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 403.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 403.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 403.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 402.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 401.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 401.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 401.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 400.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 400.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 400.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 399.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 399.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 396.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 395.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 393.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 390.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 389.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 388.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 386.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 386.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 386.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 385.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 385.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 384.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 382.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 381.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 381.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 381.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 380.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 379.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 379.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 378.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 376.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 376.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 374.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 373.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 373.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 373.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 372.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 368.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 364.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 364.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 362.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 361.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 361.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 360.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 359.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 359.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 359.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 358.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 356.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 355.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 353.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 349.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 348.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 348.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 345.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 345.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 342.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 342.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 341.5
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 339.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 335.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 333.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 333.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 330.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 329.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 328.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 325.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 325.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 322.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 322.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 321.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 310.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 305.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 298.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 287.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 286.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 284.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 258.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 252.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 237.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 212.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

256.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 256.1
Samples: 4

Max nTPM: 347.0
Min nTPM: 194.1
Sample A Female 347.0
Sample B Female 255.3
Sample C Male 227.8
Sample D Male 194.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

524.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 524.7
Samples: 4

Max nTPM: 576.7
Min nTPM: 475.9
Sample A Male 475.9
Sample B Male 576.7
Sample C Female 519.2
Sample D Female 526.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.0
69734572 Antisense, RP_050503_01_B10, Mouse strain C57BL/6J (56 days, male) 11.0

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