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RPL13
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  • TISSUE

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  • RPL13
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1417.2 nTPM
HPA Brain:935.5 nTPM
GTEx:1417.2 nTPM
FANTOM5:86.2 Scaled Tags Per Million
Pig:2.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

935.5
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 703.5
2565 Male, age 75, midline 864.8
1981 Female, age 72, midline 781.9
2194 Female, age 79, both hemispheres 668.9
2048 Male, age 55, midline 609.5
2816 Male, age 47, midline 592.4
Cervical spinal cord, dorsal horn
nTPM: 641.4
2173 Female, age 72, unknown 822.8
2069 Male, age 47, both hemispheres 744.4
2296 Male, age 66, both hemispheres 709.0
1877 Male, age 55, unknown 656.2
2297 Male, age 75, both hemispheres 485.6
2721 Male, age 90, both hemispheres 430.7
Cervical spinal cord, ventral horn
nTPM: 935.5
2809 Male, age 90, both hemispheres 1253.3
2480 Male, age 75, both hemispheres 1205.9
2098 Female, age 72, unknown 965.3
2295 Male, age 66, both hemispheres 855.0
2068 Male, age 55, unknown 792.5
2820 Female, age 79, both hemispheres 541.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1417.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1417.2
Samples: 204

Max nTPM: 3992.9
Min nTPM: 536.8
Std nTPM: 489.1
Median nTPM: 1323.3
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 3992.9
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 3356.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2850.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2714.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2591.4
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 2490.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2428.5
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 2348.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2343.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2335.0
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 2280.2
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 2226.5
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 2209.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 2159.4
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 2153.0
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 2127.1
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 2101.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 2093.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 2040.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 2030.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 2019.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2002.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 2002.1
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 1984.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1983.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1973.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 1942.5
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 1915.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1889.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1880.3
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 1875.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1872.5
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 1851.1
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 1835.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1829.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1792.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1789.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1788.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1784.8
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 1775.0
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 1750.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1748.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1733.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1722.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1717.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1710.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1705.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1703.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1692.2
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 1690.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1671.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1659.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1655.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1648.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1643.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1636.2
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 1623.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1617.2
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 1611.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 1607.9
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1580.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1574.9
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 1569.2
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1567.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1558.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1555.2
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1551.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 1550.6
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1550.6
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1548.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1546.7
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 1544.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1531.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1529.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1528.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1508.8
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1508.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1504.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1476.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1466.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1460.3
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 1452.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1447.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1443.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1441.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1437.6
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 1433.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1416.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1412.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1411.5
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 1405.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1402.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1395.1
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 1394.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1392.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1380.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1371.4
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1370.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1359.8
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1340.0
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 1331.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1326.3
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 1320.2
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 1320.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1318.1
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 1312.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1305.9
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1301.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1283.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1278.7
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 1278.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1277.3
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 1276.7
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1260.3
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 1253.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1253.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1245.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1239.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1237.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1232.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1215.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1212.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1207.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1205.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1201.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1194.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1189.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1185.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1184.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1180.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1176.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1174.2
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1168.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1165.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1163.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1162.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1159.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1157.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1156.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1153.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1150.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1131.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 1128.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1126.8
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1124.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1122.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1120.1
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 1119.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1112.8
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1112.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1109.9
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 1108.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1096.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1096.6
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 1095.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1094.0
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 1084.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1066.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1058.7
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1038.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1037.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1032.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1031.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1030.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1027.8
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 1007.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1003.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1002.5
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 996.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 995.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 989.6
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 988.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 981.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 973.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 943.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 939.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 927.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 915.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 905.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 897.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 890.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 887.7
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 886.6
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 883.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 876.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 873.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 850.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 847.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 845.2
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 825.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 825.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 825.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 816.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 810.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 788.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 764.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 761.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 753.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 739.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 723.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 718.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 632.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 624.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 536.8
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

86.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 86.2
FF:10181-103D1 60 years, female 98.8
FF:10159-103A6 76 years, female 73.6

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 2.3
Samples: 4

Max nTPM: 3.1
Min nTPM: 0.7
Sample A Female 3.1
Sample B Female 2.8
Sample C Male 0.7
Sample D Male 2.5
Ventral spinal cord
nTPM: 2.3
Samples: 4

Max nTPM: 3.6
Min nTPM: 1.3
Sample A Female 2.5
Sample B Female 3.6
Sample C Male 1.3
Sample D Male 1.9

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