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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:4874.9 nTPM
HPA:3209.1 nTPM
GTEx:4874.9 nTPM
FANTOM5:814.8 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA051702
Ovarian stroma cells Medium


OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3209.1
overview
Female, age 64
Ovary sample 192
nTPM: 2801.8
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 4007.1
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 2052
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 2879.8
N/A
Female, age 16
Ovary sample 3663
nTPM: 5671
N/A
Female, age 20
Ovary sample 3664
nTPM: 2793.3
N/A
Female, age 32
Ovary sample 3665
nTPM: 2259

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4874.9
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 4874.9
Samples: 193

Max nTPM: 11562.8
Min nTPM: 1591.4
Std nTPM: 1787.8
Median nTPM: 4449.9
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 11562.8
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 9979.6
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 9909.6
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 9872.4
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 9637.7
GTEX-183WM-1926-SM-72D5F 70-79 years, female 9387.7
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 9105.1
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 9007.4
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 8856.8
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 8755.0
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 8362.2
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 8343.1
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 8209.7
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 7892.5
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 7821.6
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 7714.1
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 7283.3
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 7176.6
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 7139.1
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 7136.4
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 7051.9
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 7048.1
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 6880.4
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 6840.7
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 6661.2
GTEX-15EOM-1526-SM-68723 20-29 years, female 6567.4
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 6476.7
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 6473.7
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 6430.1
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 6355.5
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 6333.9
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 6329.1
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 6272.7
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 6250.4
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 6195.6
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 6145.6
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 6115.3
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 6062.0
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 6042.9
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 6038.0
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 6038.0
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 6037.1
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 6019.3
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 5997.9
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 5960.0
GTEX-RU72-2226-SM-46MUE 50-59 years, female 5942.2
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 5890.3
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 5880.5
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 5878.3
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 5877.9
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 5874.9
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 5858.3
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 5808.9
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 5805.7
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 5797.3
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 5769.8
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 5743.1
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 5672.5
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 5634.2
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 5573.8
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 5570.1
GTEX-QVJO-3126-SM-COH22 60-69 years, female 5566.8
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 5557.1
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 5453.8
GTEX-R45C-2526-SM-GRR28 60-69 years, female 5414.1
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 5359.5
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 5359.0
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 5349.1
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 5342.7
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 5340.7
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 5327.1
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 5320.7
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 5248.0
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 5223.8
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 5186.4
GTEX-S32W-1226-SM-4AD67 50-59 years, female 5182.1
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 5063.7
GTEX-13SLX-2426-SM-664OM 50-59 years, female 5011.5
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 4984.5
GTEX-14BIN-1426-SM-664NI 50-59 years, female 4970.1
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 4966.6
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 4960.5
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 4937.3
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 4935.3
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 4910.1
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 4904.1
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 4838.8
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 4801.3
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 4694.4
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 4675.2
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 4641.4
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 4638.5
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 4634.0
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 4610.8
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 4563.8
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 4500.2
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 4449.9
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 4448.9
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 4433.1
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 4422.2
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 4408.1
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 4374.6
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 4365.1
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 4349.4
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 4330.2
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 4301.9
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 4243.3
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 4241.4
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 4241.1
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 4236.1
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 4220.0
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 4219.5
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 4193.3
GTEX-11I78-1926-SM-59878 50-59 years, female 4171.8
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 4161.5
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 4154.0
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 4150.8
GTEX-S341-0726-SM-4AD5R 40-49 years, female 4145.4
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 4142.9
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 4117.0
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 4074.5
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 4055.4
GTEX-145ME-1226-SM-5MR87 40-49 years, female 4049.9
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 4047.2
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 4032.5
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 4018.3
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 4013.5
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 3961.2
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 3961.1
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 3921.2
GTEX-14PKV-1226-SM-6871T 20-29 years, female 3920.2
GTEX-QCQG-1426-SM-48U22 50-59 years, female 3914.9
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 3912.5
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 3910.2
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 3909.9
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 3890.7
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 3861.0
GTEX-P78B-1926-SM-3P616 40-49 years, female 3816.7
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 3801.2
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 3785.1
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 3778.3
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 3755.4
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 3748.6
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 3731.3
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 3694.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 3675.8
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 3650.4
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 3648.5
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 3569.8
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 3551.3
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 3502.8
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 3477.1
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 3460.4
GTEX-18D9A-0826-SM-718C1 30-39 years, female 3418.6
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 3408.2
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 3366.6
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 3343.5
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 3273.8
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 3236.1
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 3196.4
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 3193.2
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 3189.9
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 3184.8
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 3132.7
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 3086.8
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 3073.3
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 3065.2
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 3053.4
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 3008.0
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 2985.3
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 2933.2
GTEX-Q734-0726-SM-48TZP 40-49 years, female 2925.2
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 2900.7
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 2874.3
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 2788.8
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 2767.3
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 2766.1
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 2739.8
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2712.0
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 2683.6
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 2600.6
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 2594.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2579.7
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 2574.2
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 2513.9
GTEX-14JG6-0626-SM-68716 30-39 years, female 2390.5
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 2303.8
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2238.3
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 2128.5
GTEX-R55G-1526-SM-48FER 40-49 years, female 2073.1
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1884.8
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1629.1
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1591.4
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

814.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 814.8
FF:10020-101D2 47,75,84 years, female 814.8

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