HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:11.6 nTPM
HPA Brain:9.0 nTPM
GTEx:11.6 nTPM
FANTOM5:33.5 Scaled Tags Per Million
Mouse:6.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039247Antibody HPA043684Antibody HPA063394
Glial cells MediumNot detectedNot detected
Neuronal cells HighHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 9.0
Sample id Sample description nTPM
Hippocampus
nTPM: 6.5
1898 Male, age 80, left hemisphere 7.6
1911 Female, age 85, right hemisphere 6.9
2148 Female, age 91, left hemisphere 6.8
2529 Female, age 94, left hemisphere 6.4
2621 Female, age 67, right hemisphere 5.6
1855 Male, age 76, left hemisphere 5.5
Dentate gyrus
nTPM: 7.6
2010 Male, age 76, both hemispheres 11.6
2246 Female, age 85, both hemispheres 7.9
2531 Female, age 67, both hemispheres 6.8
2528 Male, age 74, both hemispheres 6.7
2530 Female, age 94, left hemisphere 6.4
1927 Female, age 91, both hemispheres 6.2
Entorhinal gyrus
nTPM: 5.7
1787 Male, age 76, left hemisphere 7.7
2117 Female, age 91, right hemisphere 6.3
1938 Female, age 85, left hemisphere 5.7
2686 Male, age 75, right hemisphere 5.2
2764 Male, age 80, right hemisphere 4.9
2613 Female, age 94, left hemisphere 4.7
Hippocampus, CA1
nTPM: 6.6
2045 Male, age 76, both hemispheres 7.2
1873 Female, age 85, both hemispheres 6.8
2527 Male, age 74, both hemispheres 6.5
2749 Male, age 80, left hemisphere 6.4
2082 Female, age 91, right hemisphere 5.9
Hippocampus, CA2
nTPM: 6.9
2249 Male, age 74, both hemispheres 10.3
1940 Female, age 85, left hemisphere 7.5
2437 Female, age 94, left hemisphere 6.9
2113 Female, age 91, right hemisphere 6.3
1963 Male, age 80, left hemisphere 5.9
1892 Male, age 76, both hemispheres 4.7
Hippocampus, CA3
nTPM: 9.0
2436 Male, age 74, both hemispheres 19.4
1867 Male, age 76, both hemispheres 8.8
2137 Male, age 80, left hemisphere 7.5
2861 Female, age 67, both hemispheres 6.3
1891 Female, age 85, both hemispheres 6.1
2620 Female, age 94, left hemisphere 5.9
Parahippocampal cortex
nTPM: 6.7
2018 Male, age 76, both hemispheres 13.3
2250 Female, age 67, right hemisphere 7.8
1933 Female, age 85, both hemispheres 6.7
2245 Female, age 91, both hemispheres 5.8
1990 Female, age 91, right hemisphere 5.7
2532 Female, age 72, left hemisphere 5.7
2692 Male, age 74, both hemispheres 5.7
2622 Female, age 67, right hemisphere 5.6
2693 Female, age 94, both hemispheres 5.4
1850 Male, age 80, both hemispheres 5.1
Perirhinal gyrus
nTPM: 5.3
1841 Female, age 85, right hemisphere 5.6
1847 Female, age 91, left hemisphere 5.6
1794 Male, age 80, right hemisphere 5.4
2521 Female, age 94, right hemisphere 5.3
2848 Male, age 76, right hemisphere 4.5
Subiculum
nTPM: 6.5
2042 Male, age 76, both hemispheres 10.2
2729 Female, age 91, right hemisphere 7.0
1901 Male, age 80, both hemispheres 6.9
2619 Male, age 74, both hemispheres 6.2
1977 Female, age 85, both hemispheres 5.6
2438 Female, age 94, left hemisphere 3.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.6
Samples: 255

Max nTPM: 103.2
Min nTPM: 0.7
Std nTPM: 12.2
Median nTPM: 7.8
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 103.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 76.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 68.5
GTEX-ZYFD-0011-R1b-SM-GRR1T 50-59 years, male 68.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 58.8
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 56.3
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 50.8
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 49.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 46.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 38.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 37.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.5
FF:10153-102I9 76 years, female 39.0
FF:10169-103B7 60 years, female 28.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 6.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.3
Sample A Male 2.9
Sample B Male 2.3
Sample C Female 3.2
Sample D Female 2.6
Hippocampal formation
nTPM: 6.2
Samples: 4

Max nTPM: 11.1
Min nTPM: 2.0
Sample A Male 2.0
Sample B Male 2.9
Sample C Female 8.6
Sample D Female 11.1

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