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FAM234A
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  • FAM234A
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:99.2 nTPM
HPA Brain:75.1 nTPM
GTEx:99.2 nTPM
FANTOM5:61.2 Scaled Tags Per Million
Pig:21.3 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 69.6
2816 Male, age 47, midline 85.1
1981 Female, age 72, midline 72.1
2565 Male, age 75, midline 64.9
2048 Male, age 55, midline 63.6
2194 Female, age 79, both hemispheres 62.1
Cervical spinal cord, dorsal horn
nTPM: 74.4
2296 Male, age 66, both hemispheres 135.0
2173 Female, age 72, unknown 90.9
1877 Male, age 55, unknown 67.5
2069 Male, age 47, both hemispheres 64.7
2721 Male, age 90, both hemispheres 48.0
2297 Male, age 75, both hemispheres 40.5
Cervical spinal cord, ventral horn
nTPM: 75.1
2098 Female, age 72, unknown 96.7
2068 Male, age 55, unknown 78.1
2820 Female, age 79, both hemispheres 74.3
2480 Male, age 75, both hemispheres 71.3
2809 Male, age 90, both hemispheres 67.9
2295 Male, age 66, both hemispheres 62.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 99.2
Samples: 204

Max nTPM: 283.3
Min nTPM: 15.7
Std nTPM: 42.4
Median nTPM: 92.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 283.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 238.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 215.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 215.0
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 209.6
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 205.2
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 202.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 188.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 186.8
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 178.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 175.5
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 173.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 168.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 165.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 162.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 161.9
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 160.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 159.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 159.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 158.5
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 156.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 155.5
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 153.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 153.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 153.1
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 152.4
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 149.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 148.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 148.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 146.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 142.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 138.1
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 137.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 134.8
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 133.9
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 133.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 133.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 132.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 132.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 131.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 130.9
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 130.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 130.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 128.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 126.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 124.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 123.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 121.6
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 120.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 120.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 118.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 118.0
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 118.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 117.8
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 115.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 115.7
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 115.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 115.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 115.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 114.8
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 114.8
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 114.2
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 113.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 112.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 112.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 110.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 110.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 108.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 108.4
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 107.9
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 105.9
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 105.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 105.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 105.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 105.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 104.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 104.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 104.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 103.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 103.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 102.7
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 101.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 101.8
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 101.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 101.2
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 100.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 100.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 100.1
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 100.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 99.8
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 98.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 98.3
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 97.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 97.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 97.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 96.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 96.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 95.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 93.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 93.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 92.4
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 92.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 92.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 92.1
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 91.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 91.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 91.6
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 91.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 91.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 90.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 90.6
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 90.4
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 90.4
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 90.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 89.6
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 89.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 89.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 89.1
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 88.4
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 86.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 85.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 85.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 84.2
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 83.8
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 83.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 83.2
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 82.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 82.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 82.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 79.7
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 79.2
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 78.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 78.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 78.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 78.4
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 78.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 77.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 77.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 77.1
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 76.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 76.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 76.4
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 76.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 75.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 75.9
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 75.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 72.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 72.2
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 72.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 69.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 69.3
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 68.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 68.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 68.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 67.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 67.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 67.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 66.8
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 66.7
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 65.7
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 65.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 64.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 64.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 63.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 63.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 63.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 61.8
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 61.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 60.5
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 60.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 59.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 59.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 59.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 58.7
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 58.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 56.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 55.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 54.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 54.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 51.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 51.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 49.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 48.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 48.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 47.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 47.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 46.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 46.5
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 46.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 44.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 44.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 44.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 44.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 43.4
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 43.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 42.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 41.5
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 41.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 40.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 39.9
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 34.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 32.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 25.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 15.7
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

61.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 61.2
FF:10181-103D1 60 years, female 71.3
FF:10159-103A6 76 years, female 51.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 21.3
Samples: 4

Max nTPM: 33.3
Min nTPM: 13.0
Sample A Female 13.0
Sample B Female 21.5
Sample C Male 33.3
Sample D Male 17.4
Ventral spinal cord
nTPM: 15.8
Samples: 4

Max nTPM: 20.9
Min nTPM: 12.8
Sample A Female 14.8
Sample B Female 12.8
Sample C Male 20.9
Sample D Male 14.6

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